Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8650 SustainPine v2.0 1473
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
Complete
sp_v2.0_unigene8673 SustainPine v2.0 635
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein like sex4 1 0.0
Internal
sp_v2.0_unigene8731 SustainPine v2.0 2013
AutoFact: plastid transcriptionally active 17 protein [Arabidopsis thaliana] gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] gb|AEE364 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cobw domain-containing protein 2-like isoform 2 0.0
Complete
sp_v2.0_unigene8738 SustainPine v2.0 1624
AutoFact: ATP sulfurylase 1, chloroplastic n=5 Tax=Brassicaceae RepID=APS1_ARATH 0.0
FL-Next: sp=ATP sulfurylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp sulfurylase 0.0
N-terminus
sp_v2.0_unigene8799 SustainPine v2.0 963
AutoFact: WS02718.B21_L19 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02718_L19 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dual specificity protein phosphatase family protein 0.0
Putative N-terminus
sp_v2.0_unigene8877 SustainPine v2.0 883
AutoFact: [H] COG0285 Folylpolyglutamate synthase 6.0e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: folylpolyglutamate mitochondrial-like 0.0
Internal
sp_v2.0_unigene8882 SustainPine v2.0 2801
AutoFact: starch synthase I [Zea mays] gb|AAB99957.2| plastid starch synthase I precursor [Zea mays] 0.0
FL-Next: sp=Soluble starch synthase 1, chloroplastic/amyloplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: soluble starch synthase i 0.0
Complete
sp_v2.0_unigene8897 SustainPine v2.0 1390
AutoFact: glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190529.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] ref|NP_001190530.1| glutamate synthase 1 [NADH] [Arabidopsis thaliana] sp|Q9LV03.2|GLUT1_ARATH RecName: Full=Glutamate synthase 1 [NA 0.0
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate synthase 1 0.0
Internal
sp_v2.0_unigene8912 SustainPine v2.0 1650
AutoFact: Phosphorylase n=1 Tax=Populus trichocarpa RepID=B9H0D3_POPTR 0.0
FL-Next: sp=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Blast2go: alpha- glucan phosphorylase l chloroplastic amyloplastic-like 0.0
N-terminus
sp_v2.0_unigene8941 SustainPine v2.0 590
AutoFact: protein phosphatase 2C 57 [Arabidopsis thaliana] sp|P49599.2|P2C57_ARATH RecName: Full=Protein phosphatase 2C 57; Short=AtPP2C57; AltName: Full=Protein phosphatase 2C PPH1; Short=PP2C PPH1 emb|CAB81429.1| protein phosphatase homolog (PPH1) [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 57 0.0
C-terminus
sp_v2.0_unigene8949 SustainPine v2.0 742
AutoFact: PsbP n=1 Tax=Gossypium hirsutum RepID=E5LBM4_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: domain-containing protein 1 0.0
Putative Complete
sp_v2.0_unigene8980 SustainPine v2.0 1757
AutoFact: monodehydroascorbate reductase [Spinacia oleracea] 0.0
FL-Next: sp=Monodehydroascorbate reductase, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: monodehydroascorbate reductase 0.0
Complete
sp_v2.0_unigene9022 SustainPine v2.0 483
AutoFact: aminoacyl-t-RNA synthetase [Arabidopsis thaliana] 3.00004e-41
FL-Next: sp=Glycyl-tRNA synthetase 2, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: aminoacyl-t-rna synthetase 0.0
Internal
sp_v2.0_unigene9201 SustainPine v2.0 2415
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene9291 SustainPine v2.0 2116
AutoFact: Tryptophan synthase beta chain 2, chloroplastic n=1 Tax=Camptotheca acuminata RepID=TRPB_CAMAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tryptophan synthase beta-subunit 0.0
Complete
sp_v2.0_unigene9304 SustainPine v2.0 1806
AutoFact: Aldose 1-epimerase, putative n=1 Tax=Ricinus communis RepID=B9S6E7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldose 1-epimerase family protein 0.0
Complete
sp_v2.0_unigene9337 SustainPine v2.0 796
AutoFact: HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Arabidopsis thaliana] gb|AED95750.1| HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytosolic purine 5 -nucleotidase-like 0.0
C-terminus
sp_v2.0_unigene9370 SustainPine v2.0 3541
AutoFact: [F] COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoribosylformylglycinamidine synthase 0.0
Complete
sp_v2.0_unigene9454 SustainPine v2.0 865
AutoFact: Contains a weak similarity to chalcone--flavonone isomerase from Pueraria lobata gi|Q43056 and containes fanconi anaemia group C protein PF|02106 domain [Arabidopsis thaliana] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chalcone isomerase-like protein 0.0
N-terminus
sp_v2.0_unigene9477 SustainPine v2.0 2551
AutoFact: Pyruvate kinase n=2 Tax=Populus trichocarpa RepID=B9HKC4_POPTR 0.0
FL-Next: sp=Pyruvate kinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pyruvate kinase 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain