Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene85703 SustainPine v2.0 1829
AutoFact: Aspartate aminotransferase n=3 Tax=Picea sitchensis RepID=A9NVA2_PICSI 0.0
FL-Next: sp=Aspartate aminotransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aspartate aminotransferase 0.0
Complete
sp_v2.0_unigene85717 SustainPine v2.0 613
AutoFact: RecName: Full=50S ribosomal protein L27, chloroplastic; AltName: Full=CL27; Flags: Precursor gb|AAA34104.1| ribosomal protein L27 [Nicotiana tabacum] gb|AAA34115.1| ribosomal protein L27 [Nicotiana tabacum] 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l27 0.0
Putative Complete
sp_v2.0_unigene85738 SustainPine v2.0 1501
AutoFact: chaperonin-60 beta subunit [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene85765 SustainPine v2.0 720
AutoFact: Pyruvate kinase n=4 Tax=Arabidopsis RepID=Q8LEY6_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.55597e-23
N-terminus
sp_v2.0_unigene85828 SustainPine v2.0 574
AutoFact: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ginkgo biloba RepID=Q0R5D7_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 2-c-methyl-d-erythritol 4-phosphate cytidyltransferase 0.0
Internal
sp_v2.0_unigene85840 SustainPine v2.0 477
AutoFact: Phosphoglucomutase/phosphomannomutase, C-terminal domain, putative [Oryza sativa Japonica Group] gb|AAX95576.1| Phosphoglucomutase/phosphomannomutase, C-terminal domain, putative [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglucomutase 0.0
Internal
sp_v2.0_unigene85914 SustainPine v2.0 642
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTQ4_RICCO 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calmodulin protein kinase 0.0
Internal
sp_v2.0_unigene85992 SustainPine v2.0 1366
AutoFact: Malate dehydrogenase n=10 Tax=Pinaceae RepID=A9NVT9_PICSI 0.0
FL-Next: sp=Malate dehydrogenase, cytoplasmic; Zea mays (Maize). 0.0
Blast2go: malate dehydrogenase 0.0
Complete
sp_v2.0_unigene86044 SustainPine v2.0 599
AutoFact: adenylosuccinate lyase [Nicotiana tabacum] 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylosuccinate lyase 0.0
Putative N-terminus
sp_v2.0_unigene86084 SustainPine v2.0 473
AutoFact: Iron-sulfur assembly protein IscA [Arabidopsis thaliana] sp|Q9XIK3.2|ISCAP_ARATH RecName: Full=Iron-sulfur assembly protein IscA, chloroplastic; AltName: Full=Plastid SufA-like protein; AltName: Full=Protein scaffold protein AtCpIscA; Flags: Precursor gb| 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iron-sulfur assembly protein 1.36398e-18
N-terminus
sp_v2.0_unigene86124 SustainPine v2.0 306
AutoFact: chloroplast FtsZ-like protein [Nicotiana tabacum] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein ftsz homolog 2- chloroplastic-like 4.34216e-15
Putative C-terminus
sp_v2.0_unigene86338 SustainPine v2.0 258
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 2.0e-23
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 3.02793e-23
Internal
sp_v2.0_unigene86388 SustainPine v2.0 1722
AutoFact: Catalase n=3 Tax=Picea sitchensis RepID=A9NUY8_PICSI 0.0
FL-Next: sp=Catalase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: catalase 1 0.0
Complete
sp_v2.0_unigene89749 SustainPine v2.0 904
AutoFact: Stress responsive alpha-beta barrel domain protein [Arabidopsis thaliana] gb|AAD24844.1| unknown protein [Arabidopsis thaliana] gb|AAR24683.1| At2g31670 [Arabidopsis thaliana] gb|AAR25640.1| At2g31670 [Arabidopsis thaliana] gb|AEC08571.1| Stress responsiv 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: stress responsive alpha-beta barrel domain protein 0.0
C-terminus
sp_v2.0_unigene91159 SustainPine v2.0 575
AutoFact: metallopeptidase M24-like protein [Arabidopsis thaliana] gb|AAL84973.1| AT3g05350/T12H1_32 [Arabidopsis thaliana] gb|AAN46861.1| At3g05350/T12H1_32 [Arabidopsis thaliana] gb|AEE74224.1| metallopeptidase M24-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable xaa-pro aminopeptidase p-like 0.0
Internal
sp_v2.0_unigene91511 SustainPine v2.0 710
AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.99723e-30
C-terminus
sp_v2.0_unigene91565 SustainPine v2.0 664
AutoFact: 30S ribosomal protein S20, putative n=1 Tax=Ricinus communis RepID=B9T1X1_RICCO 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s20 0.0
C-terminus
sp_v2.0_unigene92010 SustainPine v2.0 453
AutoFact: Methionine synthase n=3 Tax=Amaranthaceae RepID=Q4H1G2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g17920 mpi7_60 0.0
Internal
sp_v2.0_unigene92235 SustainPine v2.0 1126
AutoFact: Os05g0230900 protein (Fragment) n=3 Tax=Oryza sativa RepID=Q0DJT2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lactoylglutathione chloroplast-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain