Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene69736 SustainPine v2.0 475
AutoFact: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9T8J0_RICCO 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 57 0.0
C-terminus
sp_v2.0_unigene69756 SustainPine v2.0 456
AutoFact: Peptidase M1 family protein [Arabidopsis thaliana] gb|AEE34143.1| Peptidase M1 family protein [Arabidopsis thaliana] 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidase m1 family protein 0.0
Putative N-terminus
sp_v2.0_unigene70132 SustainPine v2.0 331
AutoFact: putative valyl-tRNA synthetase [Oryza sativa Japonica Group] 8.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.79144e-37
Internal
sp_v2.0_unigene70461 SustainPine v2.0 394
AutoFact: Porphobilinogen deaminase, chloroplastic n=1 Tax=Pisum sativum RepID=HEM3_PEA 3.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxymethylbilane synthase 2.91642e-34
Putative C-terminus
sp_v2.0_unigene70665 SustainPine v2.0 349
AutoFact: 50S ribosomal protein L29 [Arabidopsis thaliana] sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor pdb|3BBO|Z Chain Z, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 9.94658e-22
Putative C-terminus
sp_v2.0_unigene70752 SustainPine v2.0 391
AutoFact: Carbonic anhydrase n=2 Tax=Picea sitchensis RepID=A9NNY0_PICSI 9.0e-13
FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbonic anhydrase 2 5.47726e-15
Internal
sp_v2.0_unigene71674 SustainPine v2.0 328
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat 2.66753e-40
Internal
sp_v2.0_unigene72069 SustainPine v2.0 148
AutoFact: Alpha-glucan water dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPI3_RICCO 5.0e-11
FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Citrus reticulata (Tangerine). 0.0
Blast2go: alpha-glucan water chloroplastic-like 7.40379e-14
Internal
sp_v2.0_unigene72384 SustainPine v2.0 189
AutoFact: starch branching enzyme II [Solanum tuberosum] 5.0e-17
FL-Next: sp=1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic; Zea mays (Maize). 0.0
Blast2go: starch branching enzyme ii 4.88848e-22
Internal
sp_v2.0_unigene73389 SustainPine v2.0 342
AutoFact: Phosphoglucomutase, putative n=1 Tax=Ricinus communis RepID=B9R9J6_RICCO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglucomutase 6.0226e-14
Internal
sp_v2.0_unigene73985 SustainPine v2.0 421
AutoFact: [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene74018 SustainPine v2.0 392
AutoFact: Glutamyl-tRNA(Gln) amidotransferase subunit A, putative n=1 Tax=Ricinus communis RepID=B9SIS4_RICCO 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamyl-trna amidotransferase subunit a 2.74074e-24
Putative C-terminus
sp_v2.0_unigene74396 SustainPine v2.0 383
AutoFact: Chloroplast sedoheptulose-1,7-bisphosphatase n=1 Tax=Morus alba var. multicaulis RepID=A8DUA7_MORAL 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sedoheptulose- -bisphosphatase 4.04975e-43
Putative N-terminus
sp_v2.0_unigene74585 SustainPine v2.0 592
AutoFact: Ketol-acid reductoisomerase, chloroplastic n=2 Tax=core eudicotyledons RepID=ILV5_SPIOL 1.0e-26
FL-Next: sp=Malate dehydrogenase; Pinus pinaster (Maritime pine). 0.0
Blast2go: ketol-acid reductoisomerase 4.00903e-30
Putative C-terminus
sp_v2.0_unigene74669 SustainPine v2.0 399
AutoFact: [I] COG3675 Predicted lipase 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipase class 3 family protein 0.0
Internal
sp_v2.0_unigene75555 SustainPine v2.0 377
AutoFact: putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] dbj|BAD21976.1| putative riboflavin biosynthesis protein ribD [Oryza sativa Japonica Group] 6.0e-20
FL-Next: tr=cDNA clone:J013024H13, full insert sequence; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: riboflavin biosynthesis 4.86514e-23
Internal
sp_v2.0_unigene75932 SustainPine v2.0 380
AutoFact: Putative elongation factor P (EF-P); 66839-65711 n=1 Tax=Arabidopsis thaliana RepID=Q9C9Y5_ARATH 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor p 1.36316e-38
Internal
sp_v2.0_unigene76097 SustainPine v2.0 321
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 2.74942e-24
Internal
sp_v2.0_unigene76953 SustainPine v2.0 760
AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ru large subunit-binding protein subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene77086 SustainPine v2.0 444
AutoFact: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase n=2 Tax=Solanaceae RepID=Q9FPL3_TOBAC 0.0
FL-Next: tr=Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: bifunctional purine biosynthesis 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain