Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene65682 SustainPine v2.0 367
AutoFact: Carbonic anhydrase n=2 Tax=Picea sitchensis RepID=A9NNY0_PICSI 4.0e-30
FL-Next: sp=Carbonic anhydrase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbonic chloroplast precursor 3.02242e-37
C-terminus
sp_v2.0_unigene65760 SustainPine v2.0 390
AutoFact: 6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Picea sitchensis RepID=A9NU97_PICSI 3.0e-39
FL-Next: sp=6,7-dimethyl-8-ribityllumazine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dimethyl-8-ribityllumazine synthase 0.0
Putative C-terminus
sp_v2.0_unigene65809 SustainPine v2.0 342
AutoFact: Glutamate synthase, putative n=1 Tax=Ricinus communis RepID=B9RII5_RICCO 5.0e-38
FL-Next: sp=Glutamate synthase 1 [NADH], chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glutamate synthase 1 1.06311e-37
Internal
sp_v2.0_unigene65958 SustainPine v2.0 358
AutoFact: GTP1/OBG family protein [Arabidopsis thaliana] gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp1 obg family protein 0.0
Internal
sp_v2.0_unigene66125 SustainPine v2.0 623
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RFN2_RICCO 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
sp_v2.0_unigene66244 SustainPine v2.0 529
AutoFact: Elongation factor EF-P n=2 Tax=Arabidopsis RepID=Q8VZW6_ARATH 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor p 0.0
Putative N-terminus
sp_v2.0_unigene66259 SustainPine v2.0 529
AutoFact: Ribokinase, putative n=1 Tax=Ricinus communis RepID=B9SU49_RICCO 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribokinase 1.99858e-35
N-terminus
sp_v2.0_unigene66414 SustainPine v2.0 392
AutoFact: beta-amylase PCT-BMYI [Solanum tuberosum] 0.0
FL-Next: sp=Beta-amylase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-amylase chloroplastic-like isoform 2 0.0
Internal
sp_v2.0_unigene66738 SustainPine v2.0 731
AutoFact: ribulose-phosphate 3-epimerase transit form [Expression vector pFL505] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3- chloroplastic-like 0.0
N-terminus
sp_v2.0_unigene67133 SustainPine v2.0 417
AutoFact: Cell division protein ftsZ homolog 2-1, chloroplastic n=2 Tax=Arabidopsis RepID=FTZ21_ARATH 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 3.07641e-26
Internal
sp_v2.0_unigene67151 SustainPine v2.0 343
AutoFact: cationic amino acid transporter 3 [Arabidopsis thaliana] dbj|BAC42395.1| putative cationic amino acid transporter [Arabidopsis thaliana] gb|AED94130.1| cationic amino acid transporter 3 [Arabidopsis thaliana] 4.0e-21
FL-Next: tr=Putative uncharacterized protein CAT1-2; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: cationic amino acid transporter 7.36239e-28
Putative C-terminus
sp_v2.0_unigene67400 SustainPine v2.0 272
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast rna-binding protein 29 5.26465e-28
Putative C-terminus
sp_v2.0_unigene67454 SustainPine v2.0 344
AutoFact: Histidinol dehydrogenase, chloroplastic n=1 Tax=Ricinus communis RepID=B9SBW3_RICCO 6.0e-30
FL-Next: sp=Histidinol dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidinol dehydrogenase 8.19166e-31
C-terminus
sp_v2.0_unigene68152 SustainPine v2.0 336
AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: isco large subunit-binding protein subunit beta 1.38672e-41
Internal
sp_v2.0_unigene68160 SustainPine v2.0 504
AutoFact: 50S ribosomal protein L12, chloroplastic n=3 Tax=Nicotiana RepID=RK12_NICSY 3.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l12-a 2.26253e-22
C-terminus
sp_v2.0_unigene68198 SustainPine v2.0 310
AutoFact: 50S ribosomal protein L29, chloroplastic precursor [Zea mays] sp|Q9SWI6.1|RK29_MAIZE RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor gb|AAD50383.1|AF147725_1 ribosomal protein L29 [Zea mays] gb|ACF88436.1| unkn 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l29 8.23444e-28
Internal
sp_v2.0_unigene69404 SustainPine v2.0 458
AutoFact: Double Clp-N motif protein [Arabidopsis thaliana] gb|AAK59640.1| unknown protein [Arabidopsis thaliana] gb|AAL15176.1| unknown protein [Arabidopsis thaliana] gb|AAM63872.1| unknown [Arabidopsis thaliana] gb|ACG24236.1| ATP-dependent Clp protease ATP-bindi 6.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clp protease-related protein chloroplastic-like 1.49939e-43
C-terminus
sp_v2.0_unigene69487 SustainPine v2.0 278
AutoFact: Ketol-acid reductoisomerase, chloroplastic n=2 Tax=core eudicotyledons RepID=ILV5_SPIOL 3.0e-18
FL-Next: sp=Ketol-acid reductoisomerase, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: ketol-acid reductoisomerase 1.19531e-21
Internal
sp_v2.0_unigene69611 SustainPine v2.0 399
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
sp_v2.0_unigene69679 SustainPine v2.0 203
AutoFact: Ketol-acid reductoisomerase, chloroplastic n=2 Tax=core eudicotyledons RepID=ILV5_SPIOL 1.0e-09
FL-Next: sp=Ketol-acid reductoisomerase, chloroplastic; Spinacia oleracea (Spinach). 0.0
Blast2go: ketol-acid reductoisomerase 7.05332e-12
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain