Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene63265 SustainPine v2.0 393
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: low psii accumulation 3 protein 6.06067e-21
C-terminus
sp_v2.0_unigene63321 SustainPine v2.0 423
AutoFact: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic n=2 Tax=Arabidopsis RepID=CLPR4_ARATH 5.0e-21
FL-Next: sp=ATP-dependent Clp protease proteolytic subunit; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.64766e-22
Internal
sp_v2.0_unigene63668 SustainPine v2.0 1085
AutoFact: Putative DnaJ protein n=1 Tax=Camellia sinensis RepID=Q2L989_CAMSI 5.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein binding protein 0.0
Complete
sp_v2.0_unigene63934 SustainPine v2.0 550
AutoFact: chloroplast chaperonin 21 [Vitis vinifera] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperonin 20 2.44969e-39
C-terminus
sp_v2.0_unigene64165 SustainPine v2.0 576
AutoFact: Ribulose-5-phosphate-3-epimerase n=2 Tax=Papilionoideae RepID=Q8S4X2_PEA 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3- chloroplastic-like 8.42983e-18
C-terminus
sp_v2.0_unigene64305 SustainPine v2.0 658
AutoFact: Thioredoxin Y, chloroplastic n=1 Tax=Oryza sativa Japonica Group RepID=TRXY_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like protein 1.4013e-45
Complete
sp_v2.0_unigene64425 SustainPine v2.0 464
AutoFact: GrpE protein homolog n=1 Tax=Picea sitchensis RepID=A9NPB5_PICSI 5.0e-27
FL-Next: sp=GrpE protein homolog; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.22815e-32
Internal
sp_v2.0_unigene64615 SustainPine v2.0 384
AutoFact: ADP-ribosylation factor GTPase-activating protein AGD2 [Arabidopsis thaliana] sp|Q9C6C3.1|AGD2_ARATH RecName: Full=ADP-ribosylation factor GTPase-activating protein AGD2; Short=ARF GAP AGD2; AltName: Full=Protein ARF-GAP DOMAIN 2; Short=AtAGD2 gb|AAG51867 4.0e-14
FL-Next: sp=ADP-ribosylation factor GTPase-activating protein AGD2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd3-like 3.81284e-28
Internal
sp_v2.0_unigene64635 SustainPine v2.0 385
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal -2-hydroxy-acid oxidase 2 5.88545e-44
C-terminus
sp_v2.0_unigene64646 SustainPine v2.0 751
AutoFact: Ribulose bisphosphate carboxylase small chain n=1 Tax=Eucalyptus globulus RepID=D1MZ08_EUCGL 4.0e-37
FL-Next: sp=Ribulose bisphosphate carboxylase small chain; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose bisphosphate carboxylase small chain 2b precursor ( isco small subunit 2b) 2.8026e-44
N-terminus
sp_v2.0_unigene64707 SustainPine v2.0 606
AutoFact: Glycolate oxidase n=4 Tax=core eudicotyledons RepID=E1AXT8_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxisomal -2-hydroxy-acid oxidase 2 0.0
Putative N-terminus
sp_v2.0_unigene64763 SustainPine v2.0 602
AutoFact: Glycolate oxidase n=1 Tax=Zantedeschia aethiopica RepID=Q84LB8_ZANAE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycolate oxidase 0.0
Internal
sp_v2.0_unigene64768 SustainPine v2.0 580
AutoFact: Glucose-6-phosphate isomerase n=1 Tax=Picea sitchensis RepID=B8LKU0_PICSI 0.0
FL-Next: sp=Glucose-6-phosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucose-6-phosphate isomerase 0.0
Putative C-terminus
sp_v2.0_unigene64852 SustainPine v2.0 373
AutoFact: putative dihydroxyacid dehydratase [Arabidopsis thaliana] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dihydroxy-acid dehydratase 1.22604e-36
Putative C-terminus
sp_v2.0_unigene64896 SustainPine v2.0 355
AutoFact: Ribulose-phosphate 3-epimerase n=1 Tax=Ricinus communis RepID=B9RLW1_RICCO 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3- chloroplastic-like 1.14507e-10
Internal
sp_v2.0_unigene64944 SustainPine v2.0 516
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TJ64_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein ftsz homolog 2- chloroplastic-like 0.0
Internal
sp_v2.0_unigene64969 SustainPine v2.0 491
AutoFact: peroxiredoxin [Hyacinthus orientalis] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxiredoxin-like protein 2.38396e-28
C-terminus
sp_v2.0_unigene64974 SustainPine v2.0 406
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] pir||T02575 adenylate kinase homolog T16B24.9 - Arabidopsis thaliana gb|AAO22704.1| putative adenylate kinase [Arabidopsis thaliana] gb|AAO42392.1| putative adenylate 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenylate kinase 6.65895e-34
Putative C-terminus
sp_v2.0_unigene65348 SustainPine v2.0 635
AutoFact: RecName: Full=Ferredoxin--NADP reductase, chloroplastic; Short=FNR; Flags: Precursor gb|AAA33029.1| ferredoxin-NADP+ reductase precursor [Mesembryanthemum crystallinum] prf||1604475A ferredoxin NADP reductase 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 9.03652e-37
C-terminus
sp_v2.0_unigene65525 SustainPine v2.0 419
AutoFact: putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] gb|AEC05873.1| putative threonyl-tRNA synthetase, putative / threonine--tRNA ligase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: threonyl-trna synthetase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain