Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene41409 SustainPine v2.0 524
• AutoFact: Xaa-pro aminopeptidase, putative n=1 Tax=Ricinus communis RepID=B9RF64_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable xaa-pro aminopeptidase p-like 0.0
Internal
sp_v2.0_unigene41514 SustainPine v2.0 330
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 9.99995e-41
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein translocase subunit chloroplastic-like 0.0
Internal
sp_v2.0_unigene41617 SustainPine v2.0 507
• AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 8.40779e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Putative N-terminus
sp_v2.0_unigene41756 SustainPine v2.0 502
• AutoFact: MCT034D06_173223 Ice plant Lambda Uni-Zap XR expression library, 5 days 0.5 M NaCl treatment, Crassulacean acid metabolism, phase IV (5:30 PM). Mesembryanthemum crystallinum cDNA clone MCT034D06 5, mRNA sequence. 3.0e-24
• FL-Next: sp=Alpha-glucan water dikinase, chloroplastic; Solanum tuberosum (Potato). 0.0
• Blast2go: alpha-glucan water chloroplastic-like 1.34887e-32
Internal
sp_v2.0_unigene42063 SustainPine v2.0 260
• AutoFact: Ferredoxin-dependent glutamate synthase; Glutamate synthase, large subunit region 1 and 3, putative; Glutamate synthase, eukaryotic n=3 Tax=Papilionoideae RepID=Q2HW53_MEDTR 4.0e-27
• FL-Next: Isoform 2 of Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 0.0
• Blast2go: ferredoxin-dependent glutamate synthase 2.41078e-32
Internal
sp_v2.0_unigene42519 SustainPine v2.0 492
• AutoFact: Probable alanyl-tRNA synthetase, chloroplastic n=1 Tax=Populus trichocarpa RepID=SYAP_POPTR 0.0
• FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; subsp. trichocarpa). 0.0
• Blast2go: alanyl-trna synthetase 0.0
Internal
sp_v2.0_unigene42693 SustainPine v2.0 286
• AutoFact: Haloacid dehalogenase-like hydrolase domain-containing protein n=6 Tax=Arabidopsis RepID=Q8VZ10_ARATH 2.0e-32
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: nhl repeat-containing protein 2-like 3.80721e-38
Internal
sp_v2.0_unigene43500 SustainPine v2.0 585
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SVM1_RICCO 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chloroplast sensor kinase 0.0
N-terminus
sp_v2.0_unigene43691 SustainPine v2.0 396
• AutoFact: Pyruvate, phosphate dikinase, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RSV8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phosphate dikinase 1 0.0
Internal
sp_v2.0_unigene44472 SustainPine v2.0 266
• AutoFact: PREDICTED: similar to Protein translocase subunit secA, chloroplastic n=1 Tax=Vitis vinifera RepID=UPI0001983A2B 3.0e-32
• FL-Next: sp=Protein translocase subunit SecA, chloroplastic; Pisum sativum (Garden pea). 0.0
• Blast2go: protein translocase subunit chloroplastic-like 8.42394e-39
Internal
sp_v2.0_unigene44826 SustainPine v2.0 490
• AutoFact: myosin [Arabidopsis thaliana] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene45419 SustainPine v2.0 457
• AutoFact: PREDICTED: similar to ACA1 (autoinhibited Ca2+ -ATPase 1); calmodulin binding isoform 2 n=1 Tax=Vitis vinifera RepID=UPI0001983A3B 1.0e-18
• FL-Next: sp=Calcium-transporting ATPase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: autoinhibited ca2+-atpase 1 4.69685e-21
N-terminus
sp_v2.0_unigene45791 SustainPine v2.0 199
• AutoFact: alanyl-tRNA synthetase [Arabidopsis thaliana] sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanyl-tRNA synthetase, chloroplastic; AltName: Full=Alanine--tRNA ligase; Short=AlaRS; AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName: Full=Protein EMBRYO D 3.0e-14
• FL-Next: sp=Probable alanyl-tRNA synthetase, chloroplastic; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: alanyl-trna synthetase 2.02786e-23
Internal
sp_v2.0_unigene46317 SustainPine v2.0 471
• AutoFact: polyribonucleotide phophorylase [Spinacia oleracea] 1.0e-18
• FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
• Blast2go: polyribonucleotide nucleotidyltransferase 7.68769e-23
Putative N-terminus
sp_v2.0_unigene46716 SustainPine v2.0 313
• AutoFact: glutathione S-transferase 6 [Arabidopsis thaliana] sp|Q96266.3|GSTF6_ARATH RecName: Full=Glutathione S-transferase 6, chloroplastic; AltName: Full=GST class phi; Flags: Precursor gb|AAG30125.2|AF288176_1 glutathione S-transferase [Arabidopsis thaliana] gb 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glutathione s-transferase 9.29922e-09
N-terminus
sp_v2.0_unigene47339 SustainPine v2.0 370
• AutoFact: Putative 97B2-like cytochrome P450 n=1 Tax=Ginkgo biloba RepID=Q6J4G9_GINBI 3.0e-21
• FL-Next: sp=Cytochrome P450 97B2, chloroplastic; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: cytochrome p450 1.72831e-24
N-terminus
sp_v2.0_unigene47485 SustainPine v2.0 620
• AutoFact: Uroporphyrinogen decarboxylase n=1 Tax=Medicago truncatula RepID=B7FK50_MEDTR 2.0e-13
• FL-Next: sp=Uroporphyrinogen decarboxylase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uroporphyrinogen decarboxylase 4.39642e-13
N-terminus
sp_v2.0_unigene50259 SustainPine v2.0 375
• AutoFact: DSPc domain containing protein 3.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein like sex4 1 7.23543e-34
Putative C-terminus
sp_v2.0_unigene51076 SustainPine v2.0 220
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TGX9_PHYPA 6.0e-17
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 2.69269e-20
Internal
sp_v2.0_unigene51463 SustainPine v2.0 254
• AutoFact: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic n=2 Tax=Arabidopsis RepID=ISE2_ARATH 8.0e-06
• FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dead-box atp-dependent rna helicase ise2 4.27384e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain