Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast stroma

Term: GO:0009570  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene642 SustainPine v2.0 1147
AutoFact: Photosystem II reaction center psb28 protein n=1 Tax=Picea sitchensis RepID=A9NPG6_PICSI 0.0
FL-Next: sp=Photosystem II reaction center psb28 protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photosystem ii reaction center psb28 protein 0.0
Complete
sp_v2.0_unigene673 SustainPine v2.0 1705
AutoFact: Aspartate carbamoyltransferase 2, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9STZ7_RICCO 0.0
FL-Next: sp=Aspartate carbamoyltransferase 3, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: aspartate carbamoyltransferase 0.0
Complete
sp_v2.0_unigene679 SustainPine v2.0 1926
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-acetyl-gamma-glutamyl-phosphate reductase 0.0
Complete
sp_v2.0_unigene727 SustainPine v2.0 1451
AutoFact: Chalcone isomerase-like protein n=1 Tax=Populus trichocarpa RepID=B9N7T4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chalcone isomerase-like protein 0.0
Complete
sp_v2.0_unigene775 SustainPine v2.0 2245
AutoFact: UDP-sulfoquinovose synthase n=1 Tax=Solanum lycopersicum RepID=C0LIR3_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-sulfoquinovose synthase 0.0
Complete
sp_v2.0_unigene831 SustainPine v2.0 3869
AutoFact: alpha-amylase-like 3 [Arabidopsis thaliana] gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase isozyme 3d 0.0
Complete
sp_v2.0_unigene875 SustainPine v2.0 1433
AutoFact: Low molecular weight protein-tyrosine-phosphatase, putative n=1 Tax=Ricinus communis RepID=B9SSV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low molecular weight protein-tyrosine-phosphatase slr0328 0.0
Complete
sp_v2.0_unigene889 SustainPine v2.0 965
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene920 SustainPine v2.0 1669
AutoFact: Putative 97B2-like cytochrome P450 n=1 Tax=Ginkgo biloba RepID=Q6J4G9_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
C-terminus
sp_v2.0_unigene1014 SustainPine v2.0 1938
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: sp=Cell division protein ftsZ homolog 2-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: plastid division protein 0.0
Complete
sp_v2.0_unigene1049 SustainPine v2.0 2782
AutoFact: Magnesium-chelatase subunit chlD, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RIG5_RICCO 0.0
FL-Next: sp=Magnesium-chelatase subunit chlD, chloroplastic; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: magnesium-chelatase subunit chld 0.0
Complete
sp_v2.0_unigene1149 SustainPine v2.0 2110
AutoFact: Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 n=1 Tax=Populus trichocarpa RepID=MTBC_POPTR 0.0
FL-Next: sp=Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; subsp. trichocarpa). 0.0
Blast2go: probable bifunctional methylthioribulose-1-phosphate dehydratase enolase-phosphatase e1-like 0.0
Complete
sp_v2.0_unigene1179 SustainPine v2.0 2271
AutoFact: pfam05193, Peptidase_M16_C, Peptidase M16 inactive domain 6.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene1200 SustainPine v2.0 2061
AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Complete
sp_v2.0_unigene1236 SustainPine v2.0 1563
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 0.0
Complete
sp_v2.0_unigene1304 SustainPine v2.0 1520
AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rossmann-fold nad -binding domain-containing protein 0.0
Complete
sp_v2.0_unigene1314 SustainPine v2.0 1488
AutoFact: Phosphoprotein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9RA78_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: propyzamide-htpersensitive 1 0.0
Putative Complete
sp_v2.0_unigene1351 SustainPine v2.0 1196
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Putative N-terminus
sp_v2.0_unigene1379 SustainPine v2.0 1766
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Complete
sp_v2.0_unigene1423 SustainPine v2.0 1377
AutoFact: [S] COG0718 Uncharacterized protein conserved in bacteria 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain