Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: vesicle-mediated transport

Term: GO:0016192  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4562 SustainPine v2.0 1880
AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 0.0
FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
N-terminus
sp_v2.0_unigene5047 SustainPine v2.0 2250
AutoFact: AP-2 complex subunit mu-1 [Arabidopsis thaliana] ref|XP_002865173.1| clathrin adaptor complexes medium subunit family protein [Arabidopsis lyrata subsp. lyrata] gb|AAB88283.1| AP47/50p [Arabidopsis thaliana] dbj|BAB08907.1| AP47/50p [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap-2 complex subunit mu 0.0
Complete
sp_v2.0_unigene5293 SustainPine v2.0 444
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1J5_RICCO 8.0e-11
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 9.6501e-13
N-terminus
sp_v2.0_unigene5773 SustainPine v2.0 1045
AutoFact: Plant sec1, putative n=1 Tax=Ricinus communis RepID=B9RBT6_RICCO 0.0
FL-Next: sp=SNARE-interacting protein KEULE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: snare-interacting protein keule 0.0
C-terminus
sp_v2.0_unigene6245 SustainPine v2.0 1827
AutoFact: Protein transport protein SFT2, putative n=1 Tax=Ricinus communis RepID=B9T1Q6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sft2 0.0
Complete
sp_v2.0_unigene6535 SustainPine v2.0 776
AutoFact: FAMU_USDA_FP_8216 Vitis shuttleworthii L., grape Vitis shuttleworthii cDNA clone WHVs051_B06 5', mRNA sequence. 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: suppressor of auxin resistance1 protein 1.40852e-40
Internal
sp_v2.0_unigene6538 SustainPine v2.0 1692
AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 3 0.0
Complete
sp_v2.0_unigene6703 SustainPine v2.0 1457
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 0.0
Complete
sp_v2.0_unigene6838 SustainPine v2.0 1602
AutoFact: vacuolar protein sorting-associated protein 24-1 [Arabidopsis thaliana] sp|Q9FFB3.1|VP241_ARATH RecName: Full=Vacuolar protein sorting-associated protein 24 homolog 1; Short=AtVPS24-1; AltName: Full=Charged multivesicular body protein 3 homolog 1; AltName 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar protein sorting-associated protein 24 homolog 1-like 0.0
Complete
sp_v2.0_unigene6856 SustainPine v2.0 1736
AutoFact: syntaxin 1B/2/3 [Arabidopsis thaliana] sp|Q9SRV7.1|SY131_ARATH RecName: Full=Putative syntaxin-131; Short=AtSYP131 gb|AAF00648.1|AC009540_25 s-syntaxin-like protein [Arabidopsis thaliana] gb|AEE73995.1| syntaxin 1B/2/3 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin 1b 2 3 0.0
Complete
sp_v2.0_unigene7006 SustainPine v2.0 2217
AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf7 family protein 0.0
Complete
sp_v2.0_unigene7183 SustainPine v2.0 1651
AutoFact: vacuolar protein sorting-associated protein 2-1 [Arabidopsis thaliana] ref|XP_002885821.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata] sp|Q9SKI2.2|VPS2A_ARATH RecName: Full=Vacuolar protein sorting-associated protein 2 homolog 1; Short=AtVPS2-1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: charged multivesicular body protein 2a 0.0
Complete
sp_v2.0_unigene7338 SustainPine v2.0 3412
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Complete
sp_v2.0_unigene7583 SustainPine v2.0 2116
AutoFact: Vacuolar protein sorting-associated protein VPS4, putative n=3 Tax=Spermatophyta RepID=B9SCR4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vacuolar sorting protein 4b 0.0
Complete
sp_v2.0_unigene8686 SustainPine v2.0 751
AutoFact: syntaxin-related protein Nt-syr1 [Nicotiana tabacum] 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin-124 0.0
C-terminus
sp_v2.0_unigene8790 SustainPine v2.0 1860
AutoFact: Synaptosomal associated protein, putative n=1 Tax=Ricinus communis RepID=B9RLS5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snap25 homologous protein snap33 0.0
Complete
sp_v2.0_unigene8825 SustainPine v2.0 840
AutoFact: R-SNARE, SEC22-family n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S6L9_PHYPA 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: r- sec22-family 1.79845e-16
Putative C-terminus
sp_v2.0_unigene9133 SustainPine v2.0 721
AutoFact: [U] COG5074 t-SNARE complex subunit, syntaxin 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: qa- sso1 syntaxin1- syp12a-group 2.32616e-41
C-terminus
sp_v2.0_unigene10062 SustainPine v2.0 2366
AutoFact: Syntaxin, putative n=1 Tax=Ricinus communis RepID=B9RPA3_RICCO 0.0
FL-Next: sp=Syntaxin-32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: qa- syp3 sed5p syntaxin 5-type 0.0
Complete
sp_v2.0_unigene10370 SustainPine v2.0 1912
AutoFact: clathrin adaptor complexes medium subunit-like protein [Arabidopsis thaliana] gb|AEE33412.1| clathrin adaptor complexes medium subunit-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain