Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chromosome organization

Term: GO:0051276  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene195 SustainPine v2.0 1844
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
sp_v2.0_unigene786 SustainPine v2.0 1386
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 2-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
N-terminus
sp_v2.0_unigene10048 SustainPine v2.0 1053
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 3.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: condensin complex components subunit 0.0
C-terminus
sp_v2.0_unigene16897 SustainPine v2.0 795
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene17200 SustainPine v2.0 668
AutoFact: histone H4 [Hyacinthus orientalis] 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene18201 SustainPine v2.0 806
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene18731 SustainPine v2.0 1610
AutoFact: CDC27 domain containing protein 4.0e-06
FL-Next: sp=DNA-binding protein BIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-binding protein bin4 0.0
C-terminus
sp_v2.0_unigene22271 SustainPine v2.0 988
AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene22300 SustainPine v2.0 602
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene23336 SustainPine v2.0 685
AutoFact: histone H4 [Hyacinthus orientalis] 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene23350 SustainPine v2.0 842
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene23434 SustainPine v2.0 499
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene23533 SustainPine v2.0 566
AutoFact: histone H4 [Hyacinthus orientalis] 2.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene23692 SustainPine v2.0 783
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 5.0e-36
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 4.2039e-45
Complete
sp_v2.0_unigene23745 SustainPine v2.0 833
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.12104e-44
Complete
sp_v2.0_unigene24139 SustainPine v2.0 902
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene24178 SustainPine v2.0 695
AutoFact: histone H4 [Hyacinthus orientalis] 3.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene24337 SustainPine v2.0 832
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
sp_v2.0_unigene25001 SustainPine v2.0 745
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9I6P2_POPTR 2.0e-13
FL-Next: sp=Helicase protein MOM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 3.45626e-14
Internal
sp_v2.0_unigene27661 SustainPine v2.0 694
AutoFact: histone H4 [Hyacinthus orientalis] 2.99878e-43
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain