|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene259
|
SustainPine v2.0
|
2310
|
|
• AutoFact: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: u4 u6 small nuclear ribonucleoprotein prp31-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene358
|
SustainPine v2.0
|
1915
|
|
• AutoFact: U3 small nucleolar ribonucleoprotein protein mpp10, putative n=1 Tax=Ricinus communis RepID=B9RB06_RICCO
|
0.0
|
|
• FL-Next: tr=U3 small nucleolar ribonucleoprotein protein mpp10, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: u3 small nucleolar ribonucleoprotein protein
|
0.0
|
|
N-terminus
|
|
sp_v2.0_unigene798
|
SustainPine v2.0
|
1525
|
|
• AutoFact: MEE49; MEE49 (maternal effect embryo arrest 49)
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosome production factor
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene948
|
SustainPine v2.0
|
3464
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SKE9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene1774
|
SustainPine v2.0
|
2447
|
|
• AutoFact: Mo25 domain containing protein
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene2171
|
SustainPine v2.0
|
2367
|
|
• AutoFact: nuclear assembly factor 1 [Arabidopsis thaliana] gb|AAF86533.1|AC002560_26 F21B7.15 [Arabidopsis thaliana] gb|AEE27583.1| nuclear assembly factor 1 [Arabidopsis thaliana]
|
8.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: protein
|
4.18988e-43
|
|
C-terminus
|
|
sp_v2.0_unigene2650
|
SustainPine v2.0
|
2067
|
|
• AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH
|
7.0e-38
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene2916
|
SustainPine v2.0
|
2212
|
|
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AAK43919.1|AF370600_1 putative protein kinase [Arabidopsis thaliana] gb|AAB80675.1| putative protein kinase [Arabidopsis thaliana] gb|ACI49790.1| At2g33580 [Arabidopsis thaliana] gb|AEC08855.1| prote
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene4026
|
SustainPine v2.0
|
2071
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein-70k
|
0.0
|
|
N-terminus
|
|
sp_v2.0_unigene4396
|
SustainPine v2.0
|
1379
|
|
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain)
|
5.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene4595
|
SustainPine v2.0
|
3525
|
|
• AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein component
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene5191
|
SustainPine v2.0
|
1059
|
|
• AutoFact: 30S ribosomal protein S31 [Arabidopsis thaliana] sp|O80439.1|RR31_ARATH RecName: Full=30S ribosomal protein S31, chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 4; Short=PSRP-4; Flags: Precursor gb|AAF64153.1|AF236826_1 plastid-specifi
|
6.0e-15
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 30s ribosomal protein s31
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene7676
|
SustainPine v2.0
|
2619
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAM10328.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AEC10458.1| RNA recognition motif-containing protein [Arabidopsis thalia
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene8766
|
SustainPine v2.0
|
1523
|
|
• AutoFact: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis thaliana] gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana] gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u11 u12 small nuclear ribonucleoprotein 35 kda protein
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene10037
|
SustainPine v2.0
|
2542
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Putative Complete
|
|
sp_v2.0_unigene10911
|
SustainPine v2.0
|
574
|
|
• AutoFact: elongation factor like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein component
|
0.0
|
|
Putative C-terminus
|
|
sp_v2.0_unigene12748
|
SustainPine v2.0
|
632
|
|
• AutoFact: [RTKL] COG0515 Serine/threonine protein kinase
|
5.0e-08
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: sym10 protein
|
4.06377e-44
|
|
Internal
|
|
sp_v2.0_unigene13925
|
SustainPine v2.0
|
807
|
|
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AAK43919.1|AF370600_1 putative protein kinase [Arabidopsis thaliana] gb|AAB80675.1| putative protein kinase [Arabidopsis thaliana] gb|ACI49790.1| At2g33580 [Arabidopsis thaliana] gb|AEC08855.1| prote
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene14492
|
SustainPine v2.0
|
1745
|
|
• AutoFact: heterogeneous nuclear ribonucleoprotein R [Gallus gallus] ref|XP_003212536.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R-like [Meleagris gallopavo]
|
4.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein r
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene15300
|
SustainPine v2.0
|
1156
|
|
• AutoFact: 40S ribosomal protein S15 n=4 Tax=Spermatophyta RepID=RS15_ELAOL
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
