Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleic acid binding

Term: GO:0003676  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene7071 SustainPine v2.0 1740
AutoFact: RNA-binding protein with multiple splicing, putative n=1 Tax=Ricinus communis RepID=B9SG87_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell wall integrity protein scw1 0.0
Complete
sp_v2.0_unigene7073 SustainPine v2.0 1015
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7097 SustainPine v2.0 1282
AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small nuclear ribonucleoprotein sm d3 0.0
Complete
sp_v2.0_unigene7220 SustainPine v2.0 737
AutoFact: nucleic acid binding / methyltransferase [Arabidopsis thaliana] gb|AAL25534.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gb|AAM91470.1| AT3g58470/F14P22_60 [Arabidopsis thaliana] gb|AEE79786.1| nucleic acid binding / methyltransferase [Arabidopsis thalia 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n -adenine-specific dna methyltransferase 2-like 0.0
N-terminus
sp_v2.0_unigene7452 SustainPine v2.0 2200
AutoFact: GCN5-related N-acetyltransferase; BRCT [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: mediator of dna damage checkpoint protein 0.0
Complete
sp_v2.0_unigene7468 SustainPine v2.0 2113
AutoFact: putative DNA binding protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding post-transcriptional regulator csx1-like 0.0
Complete
sp_v2.0_unigene7539 SustainPine v2.0 1683
AutoFact: TBP-associated factor 4 [Arabidopsis thaliana] gb|AAR21620.1| TATA-binding protein associated factor 4b [Arabidopsis thaliana] dbj|BAF01312.1| hypothetical protein [Arabidopsis thaliana] gb|AED94913.1| TBP-associated factor 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation 0.0
C-terminus
sp_v2.0_unigene7554 SustainPine v2.0 2304
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c2-h2 zinc finger protein 0.0
Complete
sp_v2.0_unigene7672 SustainPine v2.0 976
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RBR6_RICCO 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7673 SustainPine v2.0 1194
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL91183.1| unknown protein [Arabidopsis thaliana] gb|AAN15705.1| unknown protein [Arabidopsis thaliana] gb|AEE85082.1| C2H2-like zinc finger protein [Arabidopsis thaliana] 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: c2h2-like zinc finger protein 0.0
Internal
sp_v2.0_unigene7676 SustainPine v2.0 2619
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAM10328.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AAN18203.1| At2g44720/F16B22.21 [Arabidopsis thaliana] gb|AEC10458.1| RNA recognition motif-containing protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete
sp_v2.0_unigene7677 SustainPine v2.0 1260
AutoFact: putative actin depolymerizing factor [Sorghum bicolor] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7721 SustainPine v2.0 2180
AutoFact: putative RNA binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene7759 SustainPine v2.0 431
AutoFact: DNAJ heat shock N-terminal domain-containing protein n=2 Tax=Arabidopsis RepID=Q9C911_ARATH 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dnaj homolog subfamily c member 21-like 4.58468e-16
Internal
sp_v2.0_unigene7807 SustainPine v2.0 1073
AutoFact: putative cell division control protein [Arabidopsis thaliana] 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division control protein 1.28344e-38
Putative N-terminus
sp_v2.0_unigene7943 SustainPine v2.0 597
AutoFact: Arginine/serine-rich splicing factor, putative n=1 Tax=Ricinus communis RepID=B9RMS6_RICCO 2.0e-14
FL-Next: sp=Protein terminal ear1; Zea mays (Maize). 0.0
Blast2go: protein 7.15243e-16
N-terminus
sp_v2.0_unigene7981 SustainPine v2.0 1518
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 4 0.0
N-terminus
sp_v2.0_unigene8003 SustainPine v2.0 813
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 5.0e-18
FL-Next: sp=60S ribosomal protein L31; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: reverse transcriptase 2.24314e-20
N-terminus
sp_v2.0_unigene8031 SustainPine v2.0 2593
AutoFact: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa Japonica Group] gb|ABA92375.1| RNA recognition motif family protein, expressed [Oryza sativa Japonica Group] gb|EEE51928.1| hypothetical protein OsJ_33542 [Oryza sativa Japoni 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene8046 SustainPine v2.0 599
AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE 3.99931e-42
FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: atp-dependent dna helicase q-like 2-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain