Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene33722 SustainPine v2.0 739
AutoFact: Putative auxin response factor 2 n=1 Tax=Cabomba aquatica RepID=E1UHX0_9MAGN 7.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 1 1.32446e-18
C-terminus
sp_v2.0_unigene34065 SustainPine v2.0 1178
AutoFact: NAM-like protein [Arabidopsis thaliana] gb|AAN15611.1| NAM-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Complete
sp_v2.0_unigene34133 SustainPine v2.0 514
AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH 2.0e-12
FL-Next: tr=C2H2-type zinc finger protein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor iiia 1.2588e-13
N-terminus
sp_v2.0_unigene34983 SustainPine v2.0 468
AutoFact: MIKCC MADS-domain protein PPMC6 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TDM3_PHYPA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mikcc mads-domain protein ppmc6 0.0
Putative N-terminus
sp_v2.0_unigene36445 SustainPine v2.0 777
AutoFact: NAC domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJA4_MALDO 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nam-like protein 0.0
Putative C-terminus
sp_v2.0_unigene36822 SustainPine v2.0 642
AutoFact: Ethylene-responsive transcription factor RAP2-3 n=2 Tax=Arabidopsis RepID=RAP23_ARATH 8.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 domain containing protein 3.38974e-42
N-terminus
sp_v2.0_unigene37079 SustainPine v2.0 382
AutoFact: DNA-directed RNA polymerase n=4 Tax=Oryza sativa RepID=B9G500_ORYSJ 8.0e-19
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 1.55727e-21
Internal
sp_v2.0_unigene37705 SustainPine v2.0 332
AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH 9.0e-15
FL-Next: tr=C2H2-type zinc finger protein, putative; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor iiia 3.31325e-17
Internal
sp_v2.0_unigene41563 SustainPine v2.0 727
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RH46_RICCO 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tcp-domain protein 1.26831e-32
N-terminus
sp_v2.0_unigene41600 SustainPine v2.0 363
AutoFact: Trihelix transcription factor GT-4 n=2 Tax=Arabidopsis RepID=TGT4_ARATH 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 4.95109e-29
N-terminus
sp_v2.0_unigene42161 SustainPine v2.0 425
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 7.0e-11
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.94698e-19
Internal
sp_v2.0_unigene47047 SustainPine v2.0 342
AutoFact: R2R3-MYB transcription factor n=1 Tax=Pinus taeda RepID=Q6V0J3_PINTA 4.0e-20
FL-Next: tr=R2R3-MYB transcription factor; Pinus taeda (Loblolly pine). 0.0
Blast2go: protein 4.419e-26
N-terminus
sp_v2.0_unigene57705 SustainPine v2.0 345
AutoFact: MADS-box transcription factor GbMADS10 n=1 Tax=Ginkgo biloba RepID=Q58A73_GINBI 7.0e-31
FL-Next: tr=Putative MADS-box family transcription factor; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-domain transcription factor 9.25059e-39
Internal
sp_v2.0_unigene60219 SustainPine v2.0 594
AutoFact: NAC transcription factor NAM-D2 [Aegilops tauschii] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nam-like protein 2.8026e-45
N-terminus
sp_v2.0_unigene64933 SustainPine v2.0 544
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RC12_RICCO 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 2.40036e-26
Internal
sp_v2.0_unigene65239 SustainPine v2.0 331
AutoFact: DNA binding protein GT-1 [Arabidopsis thaliana] gb|AEE29019.1| DNA binding protein GT-1 [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 1.05097e-43
Putative C-terminus
sp_v2.0_unigene65502 SustainPine v2.0 517
AutoFact: DNA binding protein GT-1 n=1 Tax=Brassica rapa RepID=A8IXS2_BRACM 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 0.0
N-terminus
sp_v2.0_unigene67344 SustainPine v2.0 208
AutoFact: Fatty acyl-CoA reductase 3 n=2 Tax=Arabidopsis RepID=FACR3_ARATH 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: male sterility protein 2 2.97146e-28
Internal
sp_v2.0_unigene75140 SustainPine v2.0 337
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain