Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene11189 SustainPine v2.0 303
AutoFact: RNA polymerase III, subunit C34 (ISS) [Ostreococcus tauri] emb|CAL58583.1| RNA polymerase III, subunit C34 (ISS) [Ostreococcus tauri] 8.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene11260 SustainPine v2.0 488
AutoFact: Homeobox protein LUMINIDEPENDENS, putative n=1 Tax=Ricinus communis RepID=B9S3T8_RICCO 3.0e-09
FL-Next: sp=Homeobox protein LUMINIDEPENDENS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: luminidependens 6.94779e-10
N-terminus
sp_v2.0_unigene11291 SustainPine v2.0 880
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L140_MALDO 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tiny transcription factor 0.0
Complete
sp_v2.0_unigene11559 SustainPine v2.0 679
AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
Internal
sp_v2.0_unigene11760 SustainPine v2.0 708
AutoFact: transcription factor DP1 [Populus tremula x Populus tremuloides] gb|AAP73785.1| DP1 [Populus tremula x Populus tremuloides] 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor e2 dimerization partner protein 0.0
C-terminus
sp_v2.0_unigene11884 SustainPine v2.0 1407
AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 4.0e-11
FL-Next: sp=GATA transcription factor 20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gata transcription factor 5.90279e-16
Complete
sp_v2.0_unigene12116 SustainPine v2.0 373
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.24469e-36
N-terminus
sp_v2.0_unigene12119 SustainPine v2.0 614
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta; Pinus rzedowskii (Mexican pine). Plastid; Chloroplast. 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Internal
sp_v2.0_unigene13202 SustainPine v2.0 864
AutoFact: vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] gb|AEC09293.1| vacuolar protein sorting-associated protein 72 [Arabidopsis thaliana] 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 72 homolog 8.14877e-34
N-terminus
sp_v2.0_unigene13236 SustainPine v2.0 3405
AutoFact: HLH domain containing protein 4.0e-13
FL-Next: sp=Transcription factor BIM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bim1 0.0
Complete
sp_v2.0_unigene13921 SustainPine v2.0 1787
AutoFact: RecName: Full=DNA-directed RNA polymerase II subunit RPB7; Short=RNA polymerase II subunit B7 gb|AAA34005.1| RNA polymerase II [Glycine max] gb|ACU13766.1| unknown [Glycine max] 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB7; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb7 0.0
Complete
sp_v2.0_unigene13995 SustainPine v2.0 1076
AutoFact: DNA-directed RNA polymerase subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SFI8_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa12 0.0
Complete
sp_v2.0_unigene14102 SustainPine v2.0 1433
AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-responsive protein iaa13 0.0
Complete
sp_v2.0_unigene14459 SustainPine v2.0 1252
AutoFact: WRKY transcription factor, putative n=1 Tax=Ricinus communis RepID=B9S4T8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene21130 SustainPine v2.0 561
AutoFact: 4,5-DOPA dioxygenase extradiol-like protein [Arabidopsis thaliana] sp|Q949R4.1|DIOXL_ARATH RecName: Full=4,5-DOPA dioxygenase extradiol-like protein gb|AAK93625.1| unknown protein [Arabidopsis thaliana] gb|AAM51245.1| unknown protein [Arabidopsis thaliana 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dopa dioxygenase extradiol-like protein 2.83173e-12
Putative C-terminus
sp_v2.0_unigene23338 SustainPine v2.0 1013
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=RPB15.9; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
Complete
sp_v2.0_unigene24975 SustainPine v2.0 3011
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator arr2-like 1.00893e-43
C-terminus
sp_v2.0_unigene25514 SustainPine v2.0 861
AutoFact: NAC domain transcription factor [Triticum aestivum] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene25621 SustainPine v2.0 985
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna-directed rna polymerase ii subunit rpb4 0.0
Complete
sp_v2.0_unigene32624 SustainPine v2.0 444
AutoFact: Isoform 2 of Trihelix transcription factor GT-1 n=1 Tax=Arabidopsis thaliana RepID=Q9FX53-2 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain