Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene8604 SustainPine v2.0 914
AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 6.0e-28
FL-Next: sp=Probable WRKY transcription factor 50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wrky7 - superfamily of tfs having wrky and zinc finger domains 1.08841e-33
Complete
sp_v2.0_unigene8720 SustainPine v2.0 931
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Putative N-terminus
sp_v2.0_unigene8733 SustainPine v2.0 1256
AutoFact: putative ribosome recycling factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosome recycling factor 0.0
Complete
sp_v2.0_unigene8848 SustainPine v2.0 2332
AutoFact: GATA transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RQG2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene8962 SustainPine v2.0 661
AutoFact: Unassigned protein
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific histone demethylase 1 homolog 3-like 3.85211e-09
C-terminus
sp_v2.0_unigene9307 SustainPine v2.0 2420
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
Complete
sp_v2.0_unigene9429 SustainPine v2.0 1673
AutoFact: RNA polymerase, dimerisation [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase third largest subunit 0.0
Complete
sp_v2.0_unigene9569 SustainPine v2.0 1202
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal
sp_v2.0_unigene9892 SustainPine v2.0 1188
AutoFact: RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein emb|CAB88535.1| WD repeat domain protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein hira 0.0
C-terminus
sp_v2.0_unigene9940 SustainPine v2.0 1810
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] gb|AAK25914.1|AF360204_1 unknown protein [Arabidopsis thaliana] dbj|BAB02324.1| unnamed protein product [Arabidopsis thaliana] gb|AAK64110.1| unknown protein [Arabidopsis thaliana] gb|AEE754 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa49 0.0
Complete
sp_v2.0_unigene10029 SustainPine v2.0 2280
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene10049 SustainPine v2.0 1126
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis corallina RepID=Q1L5Z7_9MAGN 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii second largest subunit 0.0
Internal
sp_v2.0_unigene10137 SustainPine v2.0 2373
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
C-terminus
sp_v2.0_unigene10224 SustainPine v2.0 1792
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene10261 SustainPine v2.0 3421
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Complete
sp_v2.0_unigene10290 SustainPine v2.0 1046
AutoFact: putative WRKY transcription factor 30 [Vitis aestivalis] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 55-like 9.87898e-28
C-terminus
sp_v2.0_unigene10368 SustainPine v2.0 428
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TA90_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: phage-type rna polymerase 0.0
Internal
sp_v2.0_unigene10519 SustainPine v2.0 690
AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] dbj|BAA97230.1| unnamed protein product [Arabidopsis thaliana] gb|AAQ89628.1| At5g23710 [Arabidopsis thaliana] gb|AED93201.1| DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc6-like 0.0
C-terminus
sp_v2.0_unigene10832 SustainPine v2.0 3289
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta 2; Pinus lambertiana (Sugar pine). Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase i subunit rpa2 0.0
C-terminus
sp_v2.0_unigene10905 SustainPine v2.0 1233
AutoFact: Tuftelin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9SDF9_RICCO 0.0
FL-Next: tr=Tuftelin interacting protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain