Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4038 SustainPine v2.0 1323
AutoFact: homeodomain protein HB2 [Populus tomentosa] 0.0
FL-Next: sp=WUSCHEL-related homeobox 8; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4071 SustainPine v2.0 1186
AutoFact: DNA primase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TVE8_VITVI 0.0
FL-Next: sp=DNA primase; Vitis vinifera (Grape). 0.0
Blast2go: dna primase small subunit 0.0
N-terminus
sp_v2.0_unigene4219 SustainPine v2.0 1817
AutoFact: putative Fip1 motif containing protein [Oryza sativa Japonica Group] gb|ABF98630.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] gb|ABF98631.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp binding 0.0
Putative N-terminus
sp_v2.0_unigene4278 SustainPine v2.0 1873
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
Putative Complete
sp_v2.0_unigene4467 SustainPine v2.0 2130
AutoFact: ketose-bisphosphate aldolase class-II-like protein [Arabidopsis thaliana] gb|AAL60010.1| unknown protein [Arabidopsis thaliana] gb|AAM91809.1| unknown protein [Arabidopsis thaliana] gb|AEE29694.1| ketose-bisphosphate aldolase class-II-like protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ketose-bisphosphate aldolase class-ii-like protein 0.0
C-terminus
sp_v2.0_unigene5261 SustainPine v2.0 1175
AutoFact: PLENA protein n=2 Tax=Antirrhineae RepID=Q41195_ANTMA 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plena protein 0.0
Complete
sp_v2.0_unigene5541 SustainPine v2.0 1463
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
C-terminus
sp_v2.0_unigene5596 SustainPine v2.0 1578
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RSV5_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta''; Cathaya argyrophylla. Plastid; Chloroplast. 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc1-like 0.0
Internal
sp_v2.0_unigene5970 SustainPine v2.0 1494
AutoFact: [R] COG2940 Proteins containing SET domain 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suvr5-like 0.0
C-terminus
sp_v2.0_unigene5987 SustainPine v2.0 3145
AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: bel1 homeotic 0.0
Complete
sp_v2.0_unigene6695 SustainPine v2.0 1704
AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAM19803.1| At1g74320/F1O17_1 [Arabidopsis thaliana] gb|AAM98234.1| putative choline kinase [Arabidopsis thaliana] gb|AAP42750.1| At1g74320 [Arabidopsis thaliana] gb|AEE35577.1| protein ki 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: choline ethanolamine kinase 0.0
Complete
sp_v2.0_unigene6703 SustainPine v2.0 1457
AutoFact: CTP_transf_2 domain containing protein 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphopantetheine adenylyltransferase 0.0
Complete
sp_v2.0_unigene6984 SustainPine v2.0 1849
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
Putative C-terminus
sp_v2.0_unigene7316 SustainPine v2.0 1917
AutoFact: Heat stress transcription factor B-2b n=3 Tax=Oryza sativa RepID=HFB2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock factor protein 7 0.0
Putative N-terminus
sp_v2.0_unigene7800 SustainPine v2.0 1459
AutoFact: WRKY family transcription factor [Arabidopsis thaliana] gb|AAQ65182.1| At4g31805 [Arabidopsis thaliana] dbj|BAE99346.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85962.1| WRKY family transcription factor [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 4.64927e-10
Internal
sp_v2.0_unigene7811 SustainPine v2.0 982
AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
Complete
sp_v2.0_unigene7837 SustainPine v2.0 1392
AutoFact: DNA-directed RNA polymerase II subunit E [Arabidopsis thaliana] gb|AAK48978.1|AF370551_1 RNA polymerase I, II and III 24.3 kDa subunit [Arabidopsis thaliana] gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5 [Arabidopsis thaliana] gb|AAC28253.1| RNA polymerase I 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerases and iii subunit rpabc1 0.0
Complete
sp_v2.0_unigene8006 SustainPine v2.0 849
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 2.0e-24
FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: homeobox-leucine zipper protein athb-6-like 5.02872e-28
Putative C-terminus
sp_v2.0_unigene8459 SustainPine v2.0 2407
AutoFact: AUX/IAA protein n=4 Tax=Solanum RepID=Q45UB0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aux iaa protein 0.0
Complete
sp_v2.0_unigene8470 SustainPine v2.0 2358
AutoFact: transcription factor (E2F) [Chenopodium rubrum] 0.0
FL-Next: Isoform 2 of Transcription factor E2FB OS=Arabidopsis thaliana GN=E2FB 0.0
Blast2go: transcription factor e2f 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain