Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4396 SustainPine v2.0 1379
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene4408 SustainPine v2.0 925
AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
N-terminus
sp_v2.0_unigene4432 SustainPine v2.0 1260
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
C-terminus
sp_v2.0_unigene4526 SustainPine v2.0 493
AutoFact: Chalcone reductase n=7 Tax=Medicago RepID=Q40309_MEDSA 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chalcone reductase 5.84339e-26
C-terminus
sp_v2.0_unigene4546 SustainPine v2.0 3601
AutoFact: Phytosulfokine receptor, putative n=1 Tax=Ricinus communis RepID=B9SQH2_RICCO 0.0
FL-Next: sp=Phytosulfokine receptor 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phytosulfokine receptor 2-like 0.0
Complete
sp_v2.0_unigene4572 SustainPine v2.0 1024
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 7.00649e-45
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
C-terminus
sp_v2.0_unigene4597 SustainPine v2.0 1549
AutoFact: dihydroorotate dehydrogenase [Arabidopsis thaliana] sp|P32746.2|PYRD_ARATH RecName: Full=Dihydroorotate dehydrogenase (quinone), mitochondrial; Short=DHOdehase; AltName: Full=Dihydroorotate oxidase; Flags: Precursor gb|AAN64025.1|AF454729_1 dihydroorotate 0.0
FL-Next: sp=Dihydroorotate dehydrogenase (quinone), mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dihydroorotate dehydrogenase 0.0
Putative Complete
sp_v2.0_unigene4617 SustainPine v2.0 1743
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Putative Complete
sp_v2.0_unigene4618 SustainPine v2.0 537
AutoFact: receptor-like kinase LRK10 [Hordeum vulgare subsp. vulgare] 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at1g67000-like 0.0
Internal
sp_v2.0_unigene4645 SustainPine v2.0 546
AutoFact: SET domain-containing protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI7_PICAB 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 1.67395e-16
N-terminus
sp_v2.0_unigene4678 SustainPine v2.0 708
AutoFact: Os07g0522900 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0D5Z4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: septum-promoting gtp-binding protein 1-like 0.0
Putative C-terminus
sp_v2.0_unigene4687 SustainPine v2.0 1046
AutoFact: ATP Binding Cassette Transporter (CrWBC1) n=1 Tax=Catharanthus roseus RepID=A7MAN9_CATRO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 0.0
Putative C-terminus
sp_v2.0_unigene4695 SustainPine v2.0 1651
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana] dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AEC10093.1| RNA recognition motif-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein with multiple splicing 0.0
C-terminus
sp_v2.0_unigene4730 SustainPine v2.0 1819
AutoFact: putative RNA-binding like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene4734 SustainPine v2.0 970
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: sp=Guanine nucleotide-binding protein subunit beta-like protein B; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: periodic tryptophan protein 2 0.0
Putative C-terminus
sp_v2.0_unigene4827 SustainPine v2.0 2120
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tmv resistance protein n-like 0.0
Internal
sp_v2.0_unigene4876 SustainPine v2.0 1637
AutoFact: nucleic acid binding protein1 [Zea mays] gb|AAA33486.1| nucleic acid-binding protein [Zea mays] gb|ACG38158.1| ribonucleoprotein [Zea mays] gb|ACL52389.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 31 kda chloroplastic-like 0.0
Complete
sp_v2.0_unigene4992 SustainPine v2.0 1644
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40 0.0
Complete
sp_v2.0_unigene5060 SustainPine v2.0 1237
AutoFact: peptide alpha-N-acetyltransferase [Arabidopsis thaliana] dbj|BAB10599.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96745.1| Unknown protein [Arabidopsis thaliana] gb|AAL47392.1| unknown protein [Arabidopsis thaliana] gb|AAM64579.1| silencing gr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: silencing group b protein 0.0
Complete
sp_v2.0_unigene5120 SustainPine v2.0 2512
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain