Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: nucleotide binding

Term: GO:0000166  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene2582 SustainPine v2.0 1102
• AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RNK5_RICCO 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 28 kda chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene2619 SustainPine v2.0 1789
• AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AEE75227.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyadenylate-binding protein 2-a 0.0
C-terminus
sp_v2.0_unigene2650 SustainPine v2.0 2067
• AutoFact: Heterogeneous nuclear ribonucleoprotein A1/A3 n=2 Tax=Arabidopsis RepID=Q9FM47_ARATH 7.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
Putative Complete
sp_v2.0_unigene2672 SustainPine v2.0 1592
• AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: wd-40 repeat protein 0.0
Putative Complete
sp_v2.0_unigene2690 SustainPine v2.0 789
• AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 1.0e-16
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: nucleic acid binding protein 5.54161e-25
Internal
sp_v2.0_unigene2713 SustainPine v2.0 871
• AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 0.0
Internal
sp_v2.0_unigene2789 SustainPine v2.0 1242
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2901 SustainPine v2.0 1403
• AutoFact: splicing factor 3B subunit 4 [Arabidopsis thaliana] gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana] gb|AEC06776.1| splicing factor 3B subunit 4 [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 3b subunit 4-like 0.0
Putative Complete
sp_v2.0_unigene2945 SustainPine v2.0 3000
• AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif family expressed 0.0
Complete
sp_v2.0_unigene3080 SustainPine v2.0 2591
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Complete
sp_v2.0_unigene3145 SustainPine v2.0 872
• AutoFact: RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana] ref|NP_001190602.1| RNA polymerase II, Rpb4, core protein [Arabidopsis thaliana] gb|AAP88340.1| At5g62950 [Arabidopsis thaliana] dbj|BAE99470.1| hypothetical protein [Arabidopsis thaliana] gb|AE 6.0e-18
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna polymerase core protein 5.11642e-29
Putative Complete
sp_v2.0_unigene3153 SustainPine v2.0 1356
• AutoFact: Leucine-rich repeat transmembrane protein kinase n=1 Tax=Glycine max RepID=C6ZRZ8_SOYBN 0.0
• FL-Next: tr=Receptor protein kinase; Pinus sylvestris (Scots pine). 0.0
• Blast2go: probably inactive leucine-rich repeat receptor-like protein kinase at3g28040-like 0.0
Internal
sp_v2.0_unigene3167 SustainPine v2.0 1900
• AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ctc-interacting domain 11 protein 0.0
Complete
sp_v2.0_unigene3305 SustainPine v2.0 1668
• AutoFact: receptor-like protein kinase BRI1-like 3 [Arabidopsis thaliana] sp|Q9LJF3.1|BRL3_ARATH RecName: Full=Receptor-like protein kinase BRI1-like 3; AltName: Full=BRASSINOSTEROID INSENSITIVE 1-like protein 3; Flags: Precursor dbj|BAB01743.1| receptor protein ki 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase bri1-like 1 0.0
Internal
sp_v2.0_unigene3411 SustainPine v2.0 2266
• AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
• FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein damaged dna-binding 2 0.0
Complete
sp_v2.0_unigene3412 SustainPine v2.0 1842
• AutoFact: RNA-binding protein [Medicago truncatula] 5.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene3473 SustainPine v2.0 1405
• AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hiv tat-specific factor 1 homolog 0.0
N-terminus
sp_v2.0_unigene3519 SustainPine v2.0 2181
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Complete
sp_v2.0_unigene3678 SustainPine v2.0 2413
• AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene3697 SustainPine v2.0 742
• AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna-binding protein 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain