Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene2803 SustainPine v2.0 2858
• AutoFact: SAP DNA-binding domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54WI5_DICDI 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribonucleoprotein ptb-binding 1-like 0.0
Complete
sp_v2.0_unigene2805 SustainPine v2.0 929
• AutoFact: carbohydrate-binding domain-containing protein [Arabidopsis thaliana] gb|AAL15255.1| AT5g01260/F7J8_240 [Arabidopsis thaliana] gb|AAN28796.1| At5g01260/F7J8_240 [Arabidopsis thaliana] gb|AED90319.1| carbohydrate-binding domain-containing protein [Arabidop 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: carbohydrate-binding domain-containing protein 4.37851e-32
Putative N-terminus
sp_v2.0_unigene2809 SustainPine v2.0 2204
• AutoFact: Sumo ligase, putative n=1 Tax=Ricinus communis RepID=B9SK46_RICCO 3.0e-34
• FL-Next: Isoform 3 of E3 SUMO-protein ligase SIZ1 OS=Arabidopsis thaliana GN=SIZ1 0.0
• Blast2go: e3 sumo-protein ligase siz1 4.28941e-35
C-terminus
sp_v2.0_unigene2834 SustainPine v2.0 2243
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
sp_v2.0_unigene2900 SustainPine v2.0 1100
• AutoFact: SOUL heme-binding protein [Arabidopsis thaliana] gb|AAD50021.1|AC007651_16 Similar to SOUL Protein [Arabidopsis thaliana] gb|AAM64525.1| SOUL-like protein [Arabidopsis thaliana] gb|ABD43013.1| At1g17100 [Arabidopsis thaliana] gb|AEE29541.1| SOUL heme-bind 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: heme-binding protein 2-like 0.0
Complete
sp_v2.0_unigene2903 SustainPine v2.0 2042
• AutoFact: Mitochondrial carrier protein [Ribes nigrum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial carrier 0.0
Complete
sp_v2.0_unigene2906 SustainPine v2.0 1437
• AutoFact: zinc finger CCCH domain-containing protein 15 [Arabidopsis thaliana] sp|Q9C9F5.1|C3H15_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 15; Short=AtC3H15 gb|AAG52611.1|AC016447_20 putative zinc finger protein; 81747-79917 [Arabidopsis thalia 2.0e-39
• FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: zinc finger ccch domain-containing protein 15 0.0
Complete
sp_v2.0_unigene2958 SustainPine v2.0 1012
• AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing 0.0
C-terminus
sp_v2.0_unigene2961 SustainPine v2.0 853
• AutoFact: NAD(P)-linked oxidoreductase-like protein [Arabidopsis thaliana] gb|AAK93594.1| unknown protein [Arabidopsis thaliana] gb|AAM45014.1| unknown protein [Arabidopsis thaliana] gb|AAM63083.1| unknown [Arabidopsis thaliana] dbj|BAD94923.1| hypothetical protein 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: putativ eribonuclease p 0.0
Complete
sp_v2.0_unigene2980 SustainPine v2.0 1303
• AutoFact: Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gb|AAL27501.1|AF439829_1 AT4g24050/T19F6_40 [Arabidopsis thaliana] gb|AAB63619.1| ribitol dehydrogenase isolog [Arabidopsis thaliana] emb|CAB51648.1| putative protein [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: short-chain dehydrogenase reductase family protein 0.0
Complete
sp_v2.0_unigene2985 SustainPine v2.0 852
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 1.49656e-28
N-terminus
sp_v2.0_unigene3033 SustainPine v2.0 2340
• AutoFact: [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: hypothetical protein SELMODRAFT_421953 [Selaginella moellendorffii] 0.0
C-terminus
sp_v2.0_unigene3048 SustainPine v2.0 1599
• AutoFact: Mitochondrial carrier protein, putative n=1 Tax=Ricinus communis RepID=B9SW87_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial carrier 0.0
Complete
sp_v2.0_unigene3052 SustainPine v2.0 849
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 3.27809e-07
Putative C-terminus
sp_v2.0_unigene3059 SustainPine v2.0 2300
• AutoFact: kinesin-like protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3082 SustainPine v2.0 968
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 0.0
• FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna-directed rna polymerase i subunit rpa1-like 0.0
Internal
sp_v2.0_unigene3152 SustainPine v2.0 1517
• AutoFact: golgin candidate 1 [Arabidopsis thaliana] sp|Q8S8N9.2|GOGC1_ARATH RecName: Full=Golgin candidate 1; Short=AtGC1; AltName: Full=Golgin-84 gb|AAS49041.1| At2g19950 [Arabidopsis thaliana] dbj|BAF01318.1| hypothetical protein [Arabidopsis thaliana] gb|AEC0694 0.0
• FL-Next: sp=Golgin candidate 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: golgin candidate 1 0.0
C-terminus
sp_v2.0_unigene3154 SustainPine v2.0 1503
• AutoFact: zinc finger CCCH domain-containing protein 12 [Arabidopsis thaliana] sp|Q9LQM3.1|C3H12_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 12; Short=AtC3H12 gb|AAF81332.1|AC007767_12 Contains similarity to an unknown protein At2g35430 gi|360814 1.0e-35
• FL-Next: sp=Zinc finger CCCH domain-containing protein 56; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: zinc finger ccch domain-containing protein 56-like 0.0
N-terminus
sp_v2.0_unigene3187 SustainPine v2.0 2509
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-lysine n-methyltransferase 0.0
Complete
sp_v2.0_unigene3199 SustainPine v2.0 1114
• AutoFact: 26S proteasome regulatory subunit N2 [Arabidopsis thaliana] gb|AAC04490.1| 26S proteasome regulatory subunit (RPN2), putative [Arabidopsis thaliana] gb|AAM20712.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] gb|AEC08730.1| 26S proteasome regu 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: 26s proteasome regulatory subunit n2 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain