Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene81481 SustainPine v2.0 1258
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene81551 SustainPine v2.0 329
AutoFact: DNA-directed RNA polymerase subunit n=3 Tax=Poaceae RepID=C5YPS4_SORBI 3.0e-14
FL-Next: sp=DNA-directed RNA polymerase subunit; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-directed rna polymerase ii kda polypeptide 5.59538e-18
N-terminus
sp_v2.0_unigene81672 SustainPine v2.0 701
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin precursor 0.0
N-terminus
sp_v2.0_unigene81694 SustainPine v2.0 579
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Calreticulin; Pinus taeda (Loblolly pine). 0.0
Blast2go: calreticulin 0.0
Internal
sp_v2.0_unigene81778 SustainPine v2.0 570
AutoFact: PREDICTED: similar to surfactant B protein, putative n=1 Tax=Ciona intestinalis RepID=UPI000180CC47 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proactivator polypeptide-like isoform 3 0.0
Putative C-terminus
sp_v2.0_unigene81928 SustainPine v2.0 609
AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: reverse transcriptase 0.0
Complete
sp_v2.0_unigene82063 SustainPine v2.0 1142
AutoFact: Ferritin n=1 Tax=Picea sitchensis RepID=C0PRI0_PICSI 0.0
FL-Next: sp=Ferritin; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferritin 0.0
Complete
sp_v2.0_unigene82122 SustainPine v2.0 1253
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Putative Complete
sp_v2.0_unigene82177 SustainPine v2.0 1428
AutoFact: DEAD box RNA helicase [Pisum sativum] gb|AAR97917.1| DEAD box RNA helicase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene82223 SustainPine v2.0 690
AutoFact: Cytochrome P450 n=1 Tax=Populus trichocarpa RepID=B9GR20_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
sp_v2.0_unigene82532 SustainPine v2.0 719
AutoFact: Calreticulin n=2 Tax=Pinaceae RepID=Q9FYV2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 0.0
Internal
sp_v2.0_unigene82584 SustainPine v2.0 310
AutoFact: Putative calreticulin (Fragment) n=1 Tax=Phormium cookianum RepID=Q2TM91_9ASPA 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calreticulin precursor 3.04104e-37
Internal
sp_v2.0_unigene82665 SustainPine v2.0 1535
AutoFact: [P] COG3338 Carbonic anhydrase 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene82740 SustainPine v2.0 843
AutoFact: eukaryotic initiation factor 4A [Oryza sativa Japonica Group] dbj|BAB21260.1| eukaryotic initiation factor 4A [Oryza sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene82771 SustainPine v2.0 481
AutoFact: RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.35117e-27
N-terminus
sp_v2.0_unigene82928 SustainPine v2.0 750
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 5.00264e-43
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: elongation factor 1- expressed 0.0
Complete
sp_v2.0_unigene82979 SustainPine v2.0 810
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Internal
sp_v2.0_unigene83011 SustainPine v2.0 817
AutoFact: EF-1 for elongation factor 1-alpha (NAEEFTU2) (Fragment) n=24 Tax=Eukaryota RepID=P94007_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- expressed 0.0
N-terminus
sp_v2.0_unigene83046 SustainPine v2.0 801
AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
N-terminus
sp_v2.0_unigene83056 SustainPine v2.0 588
AutoFact: elongation factor 1 alpha [Saccharum hybrid cultivar CP65-357] 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- expressed 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain