Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene6803 SustainPine v2.0 821
• AutoFact: transcription factor TCP9 [Arabidopsis thaliana] sp|O64647.1|TCP9_ARATH RecName: Full=Transcription factor TCP9 gb|AAK43925.1|AF370606_1 putative PCF2-like DNA binding protein [Arabidopsis thaliana] gb|AAC06168.1| putative PCF2-like DNA binding protein [A 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tcp9-like 1.85e-39
Putative N-terminus
sp_v2.0_unigene6813 SustainPine v2.0 520
• AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
• FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: phytochrome o 0.0
Internal
sp_v2.0_unigene6868 SustainPine v2.0 2830
• AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nac domain ipr003441 0.0
C-terminus
sp_v2.0_unigene6911 SustainPine v2.0 2169
• AutoFact: putative CCAAT-binding transcription factor [Oryza sativa Japonica Group] 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear transcription factor y subunit a-9-like 0.0
Complete
sp_v2.0_unigene6997 SustainPine v2.0 1476
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab-18 0.0
Complete
sp_v2.0_unigene7026 SustainPine v2.0 728
• AutoFact: Homeobox-leucine zipper protein HAT2 n=3 Tax=Brassicaceae RepID=HAT2_ARATH 3.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat1 2.1949e-37
N-terminus
sp_v2.0_unigene7050 SustainPine v2.0 2063
• AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger protein 622 0.0
Complete
sp_v2.0_unigene7055 SustainPine v2.0 1245
• AutoFact: MADS-domain protein DAL10 n=1 Tax=Picea abies RepID=Q71UQ7_PICAB 0.0
• FL-Next: tr=MADS-domain protein DAL10; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: mads-domain transcription factor 0.0
Complete
sp_v2.0_unigene7073 SustainPine v2.0 1015
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene7128 SustainPine v2.0 3154
• AutoFact: Basic-leucine zipper transcription factor-like protein n=4 Tax=Arabidopsis RepID=B3H7M2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: bzip transcription factor 0.0
Putative Complete
sp_v2.0_unigene7177 SustainPine v2.0 1475
• AutoFact: Ebs-bah-phd domain-containing protein n=7 Tax=Magnoliophyta RepID=B9IAJ0_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ebs-bah-phd domain-containing protein 0.0
Complete
sp_v2.0_unigene7180 SustainPine v2.0 583
• AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
• FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Internal
sp_v2.0_unigene7248 SustainPine v2.0 855
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] emb|CAB81804.1| putative protein [Arabidopsis thaliana] gb|AAM60968.1| unknown [Arabidopsis thaliana] gb|AAM98182.1| putative protein [Arabidopsis thaliana] gb|AAP13430.1| At3g54390 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 2.66892e-10
C-terminus
sp_v2.0_unigene7249 SustainPine v2.0 612
• AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: fact complex subunit ssrp1 4.50652e-37
Putative C-terminus
sp_v2.0_unigene7269 SustainPine v2.0 1075
• AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 0.0
• FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene7318 SustainPine v2.0 532
• AutoFact: Homeobox-leucine zipper protein HAT14 n=2 Tax=Zea mays RepID=B6TXE8_MAIZE 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat14-like 0.0
C-terminus
sp_v2.0_unigene7475 SustainPine v2.0 1101
• AutoFact: Ethylene-responsive element binding factor-like protein n=5 Tax=Picea sitchensis RepID=E0ZGY9_PICSI 4.2039e-45
• FL-Next: tr=Ethylene-responsive element binding factor-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive element binding factor-like protein 0.0
Complete
sp_v2.0_unigene7520 SustainPine v2.0 1511
• AutoFact: Ethylene-responsive transcription factor 1A n=1 Tax=Medicago truncatula RepID=A9P6A4_MEDTR 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete
sp_v2.0_unigene7538 SustainPine v2.0 1119
• AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 6.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ap2 erf domain-containing transcription factor 0.0
Putative Complete
sp_v2.0_unigene7540 SustainPine v2.0 1647
• AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 7.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ethylene-responsive transcription factor 1a 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain