Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene5830 SustainPine v2.0 2134
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule-like 0.0
C-terminus
sp_v2.0_unigene5876 SustainPine v2.0 789
AutoFact: Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana] ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana] sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Complete
sp_v2.0_unigene5879 SustainPine v2.0 1005
AutoFact: Os03g0191000 protein n=2 Tax=Oryza sativa Japonica Group RepID=Q0DUE4_ORYSJ 4.0e-13
FL-Next: sp=Calmodulin-binding transcription activator 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding transcription activator 2 1.2504e-13
N-terminus
sp_v2.0_unigene6040 SustainPine v2.0 957
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
Complete
sp_v2.0_unigene6082 SustainPine v2.0 1751
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
Complete
sp_v2.0_unigene6106 SustainPine v2.0 492
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.67938e-17
N-terminus
sp_v2.0_unigene6126 SustainPine v2.0 1827
AutoFact: Homeobox transcription factor SKN2 n=3 Tax=Pinaceae RepID=Q9ZR90_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN2; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeobox transcription factor kn2 0.0
Complete
sp_v2.0_unigene6286 SustainPine v2.0 1054
AutoFact: Floricaula/leafy-like protein FL1 n=2 Tax=Pinaceae RepID=NEED_PINRA 0.0
FL-Next: sp=Floricaula/leafy-like protein FL1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: needly-like protein 0.0
N-terminus
sp_v2.0_unigene6343 SustainPine v2.0 883
AutoFact: Putative ripening-related bZIP protein n=1 Tax=Vitis vinifera RepID=Q9M4H1_VITVI 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid-insensitive 5-like protein 0.0
C-terminus
sp_v2.0_unigene6346 SustainPine v2.0 730
AutoFact: Unassigned protein
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
sp_v2.0_unigene6365 SustainPine v2.0 943
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-directed rna polymerase iii subunit rpc2 0.0
Complete
sp_v2.0_unigene6414 SustainPine v2.0 895
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription-repair-coupling factor-like 0.0
Complete
sp_v2.0_unigene6538 SustainPine v2.0 1692
AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 3 0.0
Complete
sp_v2.0_unigene6562 SustainPine v2.0 734
AutoFact: Homeobox-leucine zipper protein HOX19 n=3 Tax=Oryza sativa RepID=HOX19_ORYSJ 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.41453e-23
C-terminus
sp_v2.0_unigene6565 SustainPine v2.0 451
AutoFact: ethylene receptor 2 [Malus x domestica] 2.0e-31
FL-Next: sp=Protein EIN4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ethylene receptor 3.27739e-36
N-terminus
sp_v2.0_unigene6600 SustainPine v2.0 441
AutoFact: Ethylene responsive element binding protein n=2 Tax=Solanum lycopersicum RepID=Q8GZE9_SOLLC 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1.60297e-20
Putative C-terminus
sp_v2.0_unigene6621 SustainPine v2.0 1110
AutoFact: AP2 domain class transcription factor n=1 Tax=Malus x domestica RepID=D5L0Z0_MALDO 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene6648 SustainPine v2.0 510
AutoFact: [T] COG2202 FOG: PAS/PAC domain 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: non-specific serine threonine protein kinase 0.0
N-terminus
sp_v2.0_unigene6674 SustainPine v2.0 750
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit ssrp1 1.27339e-34
Putative Complete
sp_v2.0_unigene6678 SustainPine v2.0 1276
AutoFact: Ethylene responsive transcription factor 1a n=1 Tax=Prunus salicina RepID=C0J9I9_9ROSA 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain