Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4093 SustainPine v2.0 1651
AutoFact: auxin response factor 6 [Arabidopsis thaliana] sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6 gb|AAT67072.1| ARF6 [Arabidopsis thaliana] gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 6-like 0.0
Internal
sp_v2.0_unigene4103 SustainPine v2.0 1309
AutoFact: GATA transcription factor 12 [Arabidopsis thaliana] sp|P69781.1|GAT12_ARATH RecName: Full=GATA transcription factor 12 dbj|BAH30596.1| hypothetical protein [Arabidopsis thaliana] gb|AED93492.1| GATA transcription factor 12 [Arabidopsis thaliana] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata domain class transcription factor 0.0
C-terminus
sp_v2.0_unigene4107 SustainPine v2.0 2566
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
Complete
sp_v2.0_unigene4162 SustainPine v2.0 1305
AutoFact: Serine/threonine-protein kinase AtPK19 , putative [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene4186 SustainPine v2.0 661
AutoFact: AG-motif binding protein-2 n=1 Tax=Nicotiana tabacum RepID=Q76DY2_TOBAC 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gata transcription 2.68754e-34
Putative Complete
sp_v2.0_unigene4253 SustainPine v2.0 1526
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
N-terminus
sp_v2.0_unigene4322 SustainPine v2.0 1098
AutoFact: DEF/GLO-like protein n=1 Tax=Pinus radiata RepID=Q9M7M7_PINRA 0.0
FL-Next: tr=DEF/GLO-like protein; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: b-class mads-box transcription factor 0.0
Complete
sp_v2.0_unigene4331 SustainPine v2.0 2273
AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene4404 SustainPine v2.0 1993
AutoFact: Transcription factor RF2a, putative n=1 Tax=Ricinus communis RepID=B9SU10_RICCO 0.0
FL-Next: sp=Probable transcription factor PosF21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor 21 0.0
Complete
sp_v2.0_unigene4442 SustainPine v2.0 2469
AutoFact: Putative MYB transcription factor n=1 Tax=Rosa rugosa RepID=F2QKV9_ROSRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 0.0
Complete
sp_v2.0_unigene4445 SustainPine v2.0 1268
AutoFact: dehydration-responsive element-binding protein 3 [Arabidopsis thaliana] sp|Q9LYD3.1|DREB3_ARATH RecName: Full=Dehydration-responsive element-binding protein 3; AltName: Full=Protein TINY 2 emb|CAB87719.1| transcription factor like protein [Arabidopsis tha 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dehydration-responsive element-binding protein 3-like 0.0
Complete
sp_v2.0_unigene4486 SustainPine v2.0 1263
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phytoclock 1 0.0
C-terminus
sp_v2.0_unigene4531 SustainPine v2.0 3070
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: sp=Chitin-inducible gibberellin-responsive protein 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
Complete
sp_v2.0_unigene4650 SustainPine v2.0 2037
AutoFact: Class III homeodomain leucine zipper protein n=2 Tax=Pinaceae RepID=E7DX27_PICGL 0.0
FL-Next: tr=Class III homeodomain leucine zipper protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: class iii homeodomain-leucine zipper protein c3hdz1 0.0
C-terminus
sp_v2.0_unigene4686 SustainPine v2.0 926
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding 0.0
Complete
sp_v2.0_unigene4707 SustainPine v2.0 615
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK34_9ASPA 2.0e-18
FL-Next: tr=Transcription factor AP2; Taxus cuspidata (Japanese yew). 0.0
Blast2go: ap2 erf domain-containing transcription factor 9.23558e-23
Putative C-terminus
sp_v2.0_unigene4721 SustainPine v2.0 1526
AutoFact: pfam03638, CXC, Tesmin/TSO1-like CXC domain 1.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cysteine-rich polycomb-like protein 0.0
Internal
sp_v2.0_unigene4849 SustainPine v2.0 1315
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bzip transcription factor 0.0
C-terminus
sp_v2.0_unigene4907 SustainPine v2.0 487
AutoFact: putative WRKY transcription factor 12 [Arabidopsis thaliana] sp|Q93WY4.1|WRK12_ARATH RecName: Full=Probable WRKY transcription factor 12; AltName: Full=WRKY DNA-binding protein 12 gb|AAK96195.1|AF404857_1 WRKY transcription factor 12 [Arabidopsis thaliana 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 12 0.0
C-terminus
sp_v2.0_unigene4942 SustainPine v2.0 497
AutoFact: transcription factor CPC [Arabidopsis thaliana] sp|O22059.1|CPC_ARATH RecName: Full=Transcription factor CPC; AltName: Full=Protein CAPRICE dbj|BAA21917.1| CPC [Arabidopsis thaliana] gb|AAD23043.1| putative MYB family transcription factor [Arabidopsis tha 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: caprice-like myb3 6.92368e-15
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain