Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2906 SustainPine v2.0 1437
AutoFact: zinc finger CCCH domain-containing protein 15 [Arabidopsis thaliana] sp|Q9C9F5.1|C3H15_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 15; Short=AtC3H15 gb|AAG52611.1|AC016447_20 putative zinc finger protein; 81747-79917 [Arabidopsis thalia 2.0e-39
FL-Next: sp=Zinc finger CCCH domain-containing protein 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 15 0.0
Complete
sp_v2.0_unigene3242 SustainPine v2.0 1651
AutoFact: Ethylene transcription factor n=2 Tax=Fagus sylvatica RepID=Q70AB2_FAGSY 6.0e-19
FL-Next: sp=Ethylene-responsive transcription factor RAP2-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap2 domain containing protein 2.25605e-23
Complete
sp_v2.0_unigene3308 SustainPine v2.0 764
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 1.4013e-45
FL-Next: sp=Nuclear transcription factor Y subunit B-3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
Complete
sp_v2.0_unigene3316 SustainPine v2.0 1027
AutoFact: RAD-like 6 protein [Arabidopsis thaliana] gb|ABD24442.1| RAD-like protein 6 [Arabidopsis thaliana] gb|AEE35694.1| RAD-like 6 protein [Arabidopsis thaliana] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rad-like 6 protein 2.05869e-30
Complete
sp_v2.0_unigene3531 SustainPine v2.0 668
AutoFact: protein DP-E2F-like 1 [Arabidopsis thaliana] emb|CAD10633.1| transcription factor E2Fe [Arabidopsis thaliana] gb|AEE78374.1| protein DP-E2F-like 1 [Arabidopsis thaliana] 2.0e-34
FL-Next: Isoform 2 of E2F transcription factor-like E2FE OS=Arabidopsis thaliana GN=E2FE 0.0
Blast2go: antagonist of e2f-dp complex 0.0
Putative N-terminus
sp_v2.0_unigene3610 SustainPine v2.0 1781
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
sp_v2.0_unigene3614 SustainPine v2.0 1162
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=Putative uncharacterized protein At2g37520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene3664 SustainPine v2.0 864
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
C-terminus
sp_v2.0_unigene3670 SustainPine v2.0 771
AutoFact: MYB transcription factor MYB172 n=1 Tax=Glycine max RepID=Q0PJF6_SOYBN 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 3.06115e-19
Complete
sp_v2.0_unigene3671 SustainPine v2.0 1405
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh13 0.0
N-terminus
sp_v2.0_unigene3694 SustainPine v2.0 1687
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
Putative Complete
sp_v2.0_unigene3852 SustainPine v2.0 715
AutoFact: Type I MADS-box transcription factor n=1 Tax=Cryptomeria japonica RepID=B2ZX88_CRYJA 7.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box domain-containing protein 1.4013e-45
N-terminus
sp_v2.0_unigene3892 SustainPine v2.0 2271
AutoFact: Class III HD-Zip protein HDZ33 n=4 Tax=Pinaceae RepID=Q0Q419_PINTA 0.0
FL-Next: tr=Class III HD-Zip protein HDZ33; Pinus taeda (Loblolly pine). 0.0
Blast2go: homeodomain-leucine zipper trancription factor hb-3 0.0
C-terminus
sp_v2.0_unigene3932 SustainPine v2.0 1447
AutoFact: Homeobox transcription factor KN4 n=1 Tax=Picea mariana RepID=Q5SC62_PICMA 0.0
FL-Next: tr=Homeobox transcription factor KN4; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: homeobox transcription factor kn4 0.0
C-terminus
sp_v2.0_unigene3951 SustainPine v2.0 1841
AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna gyrase subunit a 0.0
Complete
sp_v2.0_unigene3953 SustainPine v2.0 1523
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome p 0.0
Putative N-terminus
sp_v2.0_unigene3972 SustainPine v2.0 916
AutoFact: transcription factor bHLH76 [Arabidopsis thaliana] gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana] emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana] 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh76 0.0
C-terminus
sp_v2.0_unigene3999 SustainPine v2.0 3376
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
C-terminus
sp_v2.0_unigene4022 SustainPine v2.0 1298
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sequence-specific dna binding transcription factor 0.0
C-terminus
sp_v2.0_unigene4060 SustainPine v2.0 1684
AutoFact: YEATS family protein [Arabidopsis thaliana] dbj|BAB11199.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59945.1| unknown protein [Arabidopsis thaliana] gb|AAM20126.1| unknown protein [Arabidopsis thaliana] gb|AAR28019.1| TAF14b [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein af-9 homolog 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain