Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: regulation of transcription, DNA-dependent

Term: GO:0006355  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene42857 SustainPine v2.0 497
AutoFact: Myb n=1 Tax=Nicotiana tabacum RepID=Q948S5_TOBAC 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB3; Pinus taeda (Loblolly pine). 0.0
Blast2go: myb-related protein 3r-1-like 0.0
Putative N-terminus
sp_v2.0_unigene43978 SustainPine v2.0 351
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 1.0e-39
FL-Next: sp=Methyl-CpG-binding domain-containing protein 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene46101 SustainPine v2.0 481
AutoFact: SET domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IA87_POPTR 0.0
FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1 0.0
Blast2go: set domain protein 0.0
Internal
sp_v2.0_unigene47017 SustainPine v2.0 348
AutoFact: DNA helicase INO80 complex-like 1 n=1 Tax=Arabidopsis thaliana RepID=F4J277_ARATH 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
sp_v2.0_unigene49280 SustainPine v2.0 209
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_7.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7THS3_VITVI 6.0e-07
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase ino80-like 9.53059e-11
Internal
sp_v2.0_unigene56504 SustainPine v2.0 248
AutoFact: PREDICTED: tyrosine-protein kinase ABL1 n=1 Tax=Monodelphis domestica RepID=UPI00020F590D 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mutant bcr abl fusion protein 1.6344e-37
Internal
sp_v2.0_unigene57583 SustainPine v2.0 539
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S877_PHYPA 2.0e-13
FL-Next: sp=Protein phosphatase 2C 32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at2g46920-like protein 1.2323e-14
Internal
sp_v2.0_unigene58681 SustainPine v2.0 204
AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 3.0e-17
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 1.17292e-20
C-terminus
sp_v2.0_unigene59500 SustainPine v2.0 289
AutoFact: Phd finger protein, putative n=1 Tax=Ricinus communis RepID=B9SP39_RICCO 9.0e-13
FL-Next: sp=Histone-lysine N-methyltransferase ATX2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: set domain protein 4.88456e-15
C-terminus
sp_v2.0_unigene63871 SustainPine v2.0 673
AutoFact: Small nuclear ribonucleoprotein-associated protein, putative n=2 Tax=Ricinus communis RepID=B9SV77_RICCO 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: small nuclear ribonucleoprotein associated protein b 9.38348e-36
N-terminus
sp_v2.0_unigene67509 SustainPine v2.0 470
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
sp_v2.0_unigene69885 SustainPine v2.0 397
AutoFact: pfam00046, Homeobox, Homeobox domain 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 5.89725e-13
N-terminus
sp_v2.0_unigene73372 SustainPine v2.0 381
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S384_PHYPA 4.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 7.31578e-12
Internal
sp_v2.0_unigene76237 SustainPine v2.0 397
AutoFact: myb family transcription factor [Arabidopsis thaliana] gb|AAD25661.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09803.1| myb family transcription factor [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb family transcription factor 1.08687e-11
Internal
sp_v2.0_unigene77072 SustainPine v2.0 518
AutoFact: Transcription factor SCREAM2 n=2 Tax=Arabidopsis RepID=SCRM2_ARATH 6.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inducer of cbf expression 3.25179e-37
C-terminus
sp_v2.0_unigene77810 SustainPine v2.0 329
AutoFact: Putative myb family transcription factor n=1 Tax=Cucumis sativus RepID=B3FNK5_CUCSA 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-like hth transcriptional regulator-like protein 9.37505e-21
Internal
sp_v2.0_unigene77887 SustainPine v2.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sequence-specific dna binding transcription factor 7.63739e-25
Complete
sp_v2.0_unigene79926 SustainPine v2.0 373
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 1.03072e-09
N-terminus
sp_v2.0_unigene80306 SustainPine v2.0 443
AutoFact: Ethylene-responsive transcription factor 4 n=4 Tax=Nicotiana RepID=ERF4_NICSY 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1.30218e-14
N-terminus
sp_v2.0_unigene81091 SustainPine v2.0 882
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain