Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sequence-specific DNA binding

Term: GO:0043565  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18573 SustainPine v2.0 1641
AutoFact: putative AP2/EREBP transcription factor [Arabidopsis thaliana] 1.0e-23
FL-Next: sp=Ethylene-responsive transcription factor ABI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene19043 SustainPine v2.0 583
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 3.0e-20
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: compound inflorescence 5.55772e-20
Internal
sp_v2.0_unigene19108 SustainPine v2.0 896
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 2.0e-24
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 2.55089e-28
C-terminus
sp_v2.0_unigene23516 SustainPine v2.0 1483
AutoFact: AP2/ERF domain-containing transcription factor n=2 Tax=Populus trichocarpa RepID=B9HSL6_POPTR 4.0e-23
FL-Next: sp=Ethylene-responsive transcription factor ABI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene29920 SustainPine v2.0 396
AutoFact: replication factor C1 [Arabidopsis thaliana] emb|CAC34494.1| replication factor C large subunit-like protein [Arabidopsis thaliana] gb|AAT47816.1| At5g22010 [Arabidopsis thaliana] gb|AED92968.1| replication factor C1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: replication factor c subunit 1-like 0.0
Internal
sp_v2.0_unigene31802 SustainPine v2.0 430
AutoFact: putative homeodomain transcription factor [Arabidopsis thaliana] 3.0e-17
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: compound inflorescence 5.4521e-36
N-terminus
sp_v2.0_unigene32624 SustainPine v2.0 444
AutoFact: Isoform 2 of Trihelix transcription factor GT-1 n=1 Tax=Arabidopsis thaliana RepID=Q9FX53-2 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 0.0
N-terminus
sp_v2.0_unigene41600 SustainPine v2.0 363
AutoFact: Trihelix transcription factor GT-4 n=2 Tax=Arabidopsis RepID=TGT4_ARATH 4.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 4.95109e-29
N-terminus
sp_v2.0_unigene49458 SustainPine v2.0 406
AutoFact: Predicted protein (Fragment) n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D3E0_LACBS 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiid-1 0.0
Putative C-terminus
sp_v2.0_unigene52564 SustainPine v2.0 154
AutoFact: HD domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ13_MALDO 2.0e-12
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.0688e-15
Internal
sp_v2.0_unigene58207 SustainPine v2.0 370
AutoFact: SCARECROW n=1 Tax=Pinus sylvestris RepID=Q0MRQ2_PINSY 1.0e-35
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 2.38193e-41
C-terminus
sp_v2.0_unigene58261 SustainPine v2.0 427
AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ9_MALDO 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor hbp-1a 6.27163e-13
N-terminus
sp_v2.0_unigene60843 SustainPine v2.0 1059
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.0e-40
FL-Next: tr=Homeobox-leucine zipper-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: homeobox-leucine zipper protein hat7 0.0
N-terminus
sp_v2.0_unigene61005 SustainPine v2.0 1077
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Putative Complete
sp_v2.0_unigene63385 SustainPine v2.0 437
AutoFact: homeobox 1 [Picea abies] 5.0e-16
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2 7.57817e-19
C-terminus
sp_v2.0_unigene65239 SustainPine v2.0 331
AutoFact: DNA binding protein GT-1 [Arabidopsis thaliana] gb|AEE29019.1| DNA binding protein GT-1 [Arabidopsis thaliana] 4.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 1.05097e-43
Putative C-terminus
sp_v2.0_unigene65502 SustainPine v2.0 517
AutoFact: DNA binding protein GT-1 n=1 Tax=Brassica rapa RepID=A8IXS2_BRACM 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding protein gt-1 0.0
N-terminus
sp_v2.0_unigene72288 SustainPine v2.0 264
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.6812e-39
Internal
sp_v2.0_unigene92438 SustainPine v2.0 1549
AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hd domain class transcription factor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain