Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12864 SustainPine v2.0 317
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.40361e-39
N-terminus
sp_v2.0_unigene13002 SustainPine v2.0 579
AutoFact: UvrD/REP helicase family protein [Trichomonas vaginalis G3] gb|EAY01482.1| UvrD/REP helicase family protein [Trichomonas vaginalis G3] 9.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: atp-dependent dna helicase 0.0
Internal
sp_v2.0_unigene13151 SustainPine v2.0 745
AutoFact: MADS-box transcription factor GbMADS3 n=1 Tax=Ginkgo biloba RepID=Q58A80_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads-box transcription factor 3 0.0
C-terminus
sp_v2.0_unigene13236 SustainPine v2.0 3405
AutoFact: HLH domain containing protein 4.0e-13
FL-Next: sp=Transcription factor BIM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bim1 0.0
Complete
sp_v2.0_unigene13288 SustainPine v2.0 499
AutoFact: Type II CPD DNA photolyase n=1 Tax=Pityrogramma austroamericana RepID=Q6WS77_9MONI 0.0
FL-Next: Isoform 2 of Deoxyribodipyrimidine photo-lyase OS=Arabidopsis thaliana GN=PHR1 0.0
Blast2go: cpd photolyase 0.0
Internal
sp_v2.0_unigene13342 SustainPine v2.0 211
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: b-block binding subunit of tfiiic 8.73608e-23
Internal
sp_v2.0_unigene13510 SustainPine v2.0 622
AutoFact: NF-X1-type zinc finger protein NFXL1 [Arabidopsis thaliana] sp|Q9SY59.1|NFXL1_ARATH RecName: Full=NF-X1-type zinc finger protein NFXL1; Short=AtNFXL1 gb|AAD32867.1|AC005489_5 F14N23.5 [Arabidopsis thaliana] gb|AEE28549.1| NF-X1-type zinc finger protein NF 3.0e-39
FL-Next: sp=NF-X1-type zinc finger protein NFXL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nf-x1-type zinc finger protein nfxl1-like 0.0
Internal
sp_v2.0_unigene13553 SustainPine v2.0 1066
AutoFact: With no lysine kinase n=1 Tax=Glycine max RepID=C0M0P9_SOYBN 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein kinase wnk8 0.0
C-terminus
sp_v2.0_unigene13588 SustainPine v2.0 1670
AutoFact: casein kinase II alpha [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase ii subunit alpha-2-like 0.0
Complete
sp_v2.0_unigene13742 SustainPine v2.0 779
AutoFact: serrate RNA effector molecule [Arabidopsis thaliana] sp|Q9ZVD0.2|SRRT_ARATH RecName: Full=Serrate RNA effector molecule gb|AAK63206.1|AF311221_1 C2H2 zinc-finger protein SERRATE [Arabidopsis thaliana] gb|AAL16137.1|AF428305_1 At2g27100/T20P8.15 [Arabidops 0.0
FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serrate rna effector molecule-like 0.0
Internal
sp_v2.0_unigene13843 SustainPine v2.0 777
AutoFact: U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] dbj|BAB10376.1| RNA helicase [Arabidopsis thaliana] gb|AED97426.1| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: activating signal cointegrator 1 complex subunit 0.0
Internal
sp_v2.0_unigene13845 SustainPine v2.0 2579
AutoFact: TGA-type basic leucine zipper protein TGA2.2 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor HBP-1b(c38); Triticum aestivum (Wheat). 0.0
Blast2go: tga transcription factor 0.0
Complete
sp_v2.0_unigene13876 SustainPine v2.0 1141
AutoFact: [S] COG1836 Predicted membrane protein 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane protein sll0875-like 0.0
Putative Complete
sp_v2.0_unigene13939 SustainPine v2.0 2014
AutoFact: bZIP transcription factor bZIP28 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic leucine zipper transcription factor-like protein 0.0
C-terminus
sp_v2.0_unigene13967 SustainPine v2.0 702
AutoFact: myb proto-oncogene protein [Arabidopsis thaliana] dbj|BAB02863.1| transcription factor-like protein [Arabidopsis thaliana] gb|AAS10061.1| MYB transcription factor [Arabidopsis thaliana] gb|ABE65977.1| myb family transcription factor [Arabidopsis thaliana] 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB1; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene13977 SustainPine v2.0 1149
AutoFact: WS00753.C21_I19 WS-PS-N-A-8 Picea glauca cDNA clone WS00753_I19 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: indeterminate -domain 14 protein 4.48416e-44
Internal
sp_v2.0_unigene14015 SustainPine v2.0 782
AutoFact: Putative MADS box transcription factor PrMADS9 n=1 Tax=Pinus radiata RepID=O24487_PINRA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mads box transcription factor 9 0.0
Complete
sp_v2.0_unigene14040 SustainPine v2.0 1611
AutoFact: putative purple acid phosphatase precursor [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: purple acid phosphatase 0.0
Complete
sp_v2.0_unigene14074 SustainPine v2.0 523
AutoFact: ethylene-responsive transcription factor ERF113 [Arabidopsis thaliana] sp|Q9LYU3.1|EF113_ARATH RecName: Full=Ethylene-responsive transcription factor ERF113 emb|CAB86640.1| putative protein [Arabidopsis thaliana] gb|AAS47615.1| At5g13330 [Arabidopsis thal 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.29765e-24
Putative N-terminus
sp_v2.0_unigene14077 SustainPine v2.0 276
AutoFact: Myb124, putative n=1 Tax=Ricinus communis RepID=B9S295_RICCO 3.0e-17
FL-Next: sp=Myb-related protein 3R-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: four lips transcription factor r2r3-myb 2.75808e-20
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain