Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene9643 SustainPine v2.0 1333
AutoFact: DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene9651 SustainPine v2.0 1478
AutoFact: bZIP transcription factor [Malus x domestica] 3.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bzip transcription factor 1.00155e-23
Putative Complete
sp_v2.0_unigene9672 SustainPine v2.0 960
AutoFact: auxin-responsive protein IAA13 [Arabidopsis thaliana] ref|NP_001118434.1| auxin-responsive protein IAA13 [Arabidopsis thaliana] gb|AAG48763.1|AF332399_1 auxin-regulated protein IAA13 [Arabidopsis thaliana] gb|AAC49054.1| IAA13 [Arabidopsis thaliana] gb|AA 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-responsive protein iaa13 6.91375e-17
C-terminus
sp_v2.0_unigene9749 SustainPine v2.0 721
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RRY3_RICCO 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional factor 0.0
C-terminus
sp_v2.0_unigene9801 SustainPine v2.0 600
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 1.0e-32
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: protein 1.97665e-32
C-terminus
sp_v2.0_unigene9874 SustainPine v2.0 1638
AutoFact: TGA10 transcription factor n=1 Tax=Nicotiana tabacum RepID=Q52MZ2_TOBAC 0.0
FL-Next: sp=TGACG-sequence-specific DNA-binding protein TGA-2.1; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: transcription factor hbp-1b -like 0.0
Putative Complete
sp_v2.0_unigene9938 SustainPine v2.0 740
AutoFact: Putative MADS box transcription factor PrMADS5 n=1 Tax=Pinus radiata RepID=O24489_PINRA 0.0
FL-Next: tr=Putative MADS box transcription factor PrMADS5; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: mads-box protein soc1-like 0.0
N-terminus
sp_v2.0_unigene9973 SustainPine v2.0 622
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] dbj|BAB02984.1| unnamed protein product [Arabidopsis thaliana] gb|AAL60009.1| unknown protein [Arabidopsis thaliana] gb|AAM44901.1| unknown protein [Arabidopsis thaliana] gb|AEE7548 4.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 3.63097e-28
N-terminus
sp_v2.0_unigene10022 SustainPine v2.0 2275
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RMJ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein 0.0
Complete
sp_v2.0_unigene10055 SustainPine v2.0 1682
AutoFact: phosphatase like protein [Arabidopsis thaliana] emb|CAB78583.1| phosphatase like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene10137 SustainPine v2.0 2373
AutoFact: WRKY transcription factor PmWRKY119 (Fragment) n=4 Tax=Pinaceae RepID=E6Y3F1_PINMO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 0.0
C-terminus
sp_v2.0_unigene10141 SustainPine v2.0 2290
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 3 0.0
Complete
sp_v2.0_unigene10153 SustainPine v2.0 1552
AutoFact: Milkweed pod1 n=1 Tax=Zea mays RepID=B5LZ60_MAIZE 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rolled leaf 9 0.0
Complete
sp_v2.0_unigene10182 SustainPine v2.0 866
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKA8_VITVI 2.0e-25
FL-Next: sp=Transcription factor TCP24; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tb1-like tcp family transcription factor 3.45064e-29
N-terminus
sp_v2.0_unigene10224 SustainPine v2.0 1792
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene10261 SustainPine v2.0 3421
AutoFact: WRKY DNA-binding protein [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable wrky transcription factor 2-like 0.0
Complete
sp_v2.0_unigene10290 SustainPine v2.0 1046
AutoFact: putative WRKY transcription factor 30 [Vitis aestivalis] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wrky transcription factor 55-like 9.87898e-28
C-terminus
sp_v2.0_unigene10294 SustainPine v2.0 922
AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RQZ6_RICCO 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene10310 SustainPine v2.0 550
AutoFact: Ethylene-responsive transcription factor TINY n=1 Tax=Arabidopsis thaliana RepID=TINY_ARATH 8.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor tiny 1.95438e-17
Putative C-terminus
sp_v2.0_unigene10322 SustainPine v2.0 1159
AutoFact: overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] gb|AAN72028.1| putative protein [Arabidopsis thaliana] gb|AAP42756.1| At5g11270 [Arabidopsis thaliana] gb|AED91654.1| overexpressor of cationic peroxidase 3 [Arabidopsis thaliana] 7.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain