Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sequence-specific DNA binding transcription factor activity

Term: GO:0003700  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene8382 SustainPine v2.0 785
• AutoFact: DDT; Homeodomain-related n=1 Tax=Medicago truncatula RepID=A2Q504_MEDTR 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.19827e-13
N-terminus
sp_v2.0_unigene8400 SustainPine v2.0 932
• AutoFact: Putative basic helix-loop-helix protein BHLH25 n=1 Tax=Lotus japonicus RepID=C0JP31_LOTJA 7.9874e-44
• FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor bhlh30 0.0
Putative N-terminus
sp_v2.0_unigene8478 SustainPine v2.0 1073
• AutoFact: nuclear factor Y, subunit B11 [Arabidopsis thaliana] gb|AAD15599.1| putative CCAAT-binding transcription factor subunit [Arabidopsis thaliana] gb|AAO42110.1| putative CCAAT-binding transcription factor subunit [Arabidopsis thaliana] gb|AEC08000.1| nuclear 9.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene8481 SustainPine v2.0 813
• AutoFact: DNA binding protein Rav [Capsicum annuum] 9.0e-36
• FL-Next: tr=APETALA2-related transcription factor 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: dna-binding protein rav1 0.0
Internal
sp_v2.0_unigene8556 SustainPine v2.0 874
• AutoFact: Transcriptional factor TINY, putative n=1 Tax=Ricinus communis RepID=B9RR65_RICCO 2.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene8594 SustainPine v2.0 3040
• AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
• FL-Next: sp=Scarecrow-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: scarecrow-like protein 1-like 0.0
Complete
sp_v2.0_unigene8604 SustainPine v2.0 914
• AutoFact: WRKY7-superfamily of TFs having WRKY and zinc finger domains n=1 Tax=Zea mays RepID=B6T167_MAIZE 6.0e-28
• FL-Next: sp=Probable WRKY transcription factor 50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: wrky7 - superfamily of tfs having wrky and zinc finger domains 1.08841e-33
Complete
sp_v2.0_unigene8657 SustainPine v2.0 1664
• AutoFact: Ocs element-binding factor, putative n=1 Tax=Ricinus communis RepID=B9R7Z2_RICCO 3.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ocs element-binding 0.0
Complete
sp_v2.0_unigene8663 SustainPine v2.0 1300
• AutoFact: DUF1762 domain containing protein 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
sp_v2.0_unigene8840 SustainPine v2.0 1021
• AutoFact: GATA transcription factor 21 [Arabidopsis thaliana] sp|Q5HZ36.2|GAT21_ARATH RecName: Full=GATA transcription factor 21 dbj|BAA97205.1| unnamed protein product [Arabidopsis thaliana] gb|ABG25059.1| At5g56860 [Arabidopsis thaliana] gb|AED96815.1| GATA trans 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gata transcription factor 22-like 0.0
C-terminus
sp_v2.0_unigene8944 SustainPine v2.0 2395
• AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubby-like f-box protein 3 0.0
Complete
sp_v2.0_unigene9112 SustainPine v2.0 1309
• AutoFact: pfam10545, MADF_DNA_bdg, Alcohol dehydrogenase transcription factor Myb/SANT-like 7.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
sp_v2.0_unigene9183 SustainPine v2.0 2154
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCQ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Complete
sp_v2.0_unigene9219 SustainPine v2.0 1181
• AutoFact: MADS-box transcription factor 18 n=4 Tax=Oryza sativa RepID=MAD18_ORYSJ 1.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mads box protein 0.0
Complete
sp_v2.0_unigene9289 SustainPine v2.0 1221
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C9_RICCO 6.0e-20
• FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 3.90149e-22
C-terminus
sp_v2.0_unigene9361 SustainPine v2.0 2754
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHR8_RICCO 0.0
• FL-Next: tr=Transcription factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: enhancer of polycomb-like protein 0.0
Complete
sp_v2.0_unigene9367 SustainPine v2.0 1762
• AutoFact: Ureidoglycine aminohydrolase n=5 Tax=Brassicaceae RepID=Q8GXV5_ARATH 0.0
• FL-Next: tr=mRNA, clone: RTFL01-03-G21; Thellungiella halophila (Salt cress). 0.0
• Blast2go: ureidoglycine aminohydrolase 0.0
Complete
sp_v2.0_unigene9476 SustainPine v2.0 2026
• AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene9478 SustainPine v2.0 2680
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein meristem l1 0.0
C-terminus
sp_v2.0_unigene9572 SustainPine v2.0 697
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SR79_RICCO 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: kanadi like transcription factor 6.16344e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain