Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene18377 SustainPine v2.0 774
AutoFact: Thylakoid membrane phosphoprotein 14 kDa, chloroplastic n=2 Tax=Arabidopsis RepID=TMP14_ARATH 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18551 SustainPine v2.0 1012
AutoFact: Proteasome maturation protein, putative n=1 Tax=Ricinus communis RepID=B9SIZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb08; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: proteasome maturation factor ump1 family protein 0.0
Complete
sp_v2.0_unigene18554 SustainPine v2.0 2130
AutoFact: thylakoid rhodanese-like protein [Arabidopsis thaliana] sp|Q9M158.2|Y4105_ARATH RecName: Full=Uncharacterized protein At4g01050, chloroplastic; Flags: Precursor gb|AAL09804.1| AT4g01050/F2N1_31 [Arabidopsis thaliana] gb|AAL15331.1| AT4g01050/F2N1_31 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g01050 f2n1_31 0.0
Complete
sp_v2.0_unigene18649 SustainPine v2.0 595
AutoFact: Carbonate dehydratase-like protein n=3 Tax=Arabidopsis RepID=Q9FYE3_ARATH 8.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbonic anhydrase family protein 1.06213e-15
C-terminus
sp_v2.0_unigene18829 SustainPine v2.0 1046
AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic; Flags: Precursor gb|AAA33680.1| nuclear encoded precursor to chloroplast protein [Pisum sativum] 0.0
FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
N-terminus
sp_v2.0_unigene19003 SustainPine v2.0 1739
AutoFact: Membrane steroid-binding protein 1 n=2 Tax=Zea mays RepID=B6TM12_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane steroid-binding protein 1 0.0
Complete
sp_v2.0_unigene19480 SustainPine v2.0 1362
AutoFact: ribosomal protein-like protein [Arabidopsis thaliana] gb|AAQ65116.1| At1g16790 [Arabidopsis thaliana] dbj|BAD42938.1| unknown protein [Arabidopsis thaliana] gb|AEE29497.1| ribosomal protein-like protein [Arabidopsis thaliana] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein 0.0
Complete
sp_v2.0_unigene20221 SustainPine v2.0 649
AutoFact: SMAD/FHA domain-containing protein [Arabidopsis thaliana] dbj|BAC43312.1| unknown protein [Arabidopsis thaliana] gb|ABD42997.1| At2g21530 [Arabidopsis thaliana] gb|AEC07191.1| SMAD/FHA domain-containing protein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zeaxanthin epoxidase 8.76806e-40
Putative C-terminus
sp_v2.0_unigene20407 SustainPine v2.0 235
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 7.22131e-26
C-terminus
sp_v2.0_unigene20493 SustainPine v2.0 1727
AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
Complete
sp_v2.0_unigene20963 SustainPine v2.0 428
AutoFact: D-ribulose-5-phosphate-3-epimerase n=2 Tax=Arabidopsis RepID=Q9SAU2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribulose-phosphate 3-epimerase 0.0
C-terminus
sp_v2.0_unigene20990 SustainPine v2.0 1160
AutoFact: Inner membrane protein ALBINO3, chloroplastic n=4 Tax=Arabidopsis RepID=ALB3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inner membrane protein albino3 0.0
Putative N-terminus
sp_v2.0_unigene21084 SustainPine v2.0 1138
AutoFact: ATP-dependent Clp protease ATP-binding subunit ClpC [Arabidopsis thaliana] dbj|BAB08738.1| ATP-dependent Clp protease, ATP-binding subunit [Arabidopsis thaliana] gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis thaliana] dbj|BAE99213.1| ATP-dependent Clp prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent clp 0.0
Putative C-terminus
sp_v2.0_unigene21318 SustainPine v2.0 1170
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_84.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX43_VITVI 9.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: proline-rich family protein 0.0
Complete
sp_v2.0_unigene21572 SustainPine v2.0 1135
AutoFact: chloroplast processing peptidase [Arabidopsis thaliana] sp|Q8H0W1.2|PLSP1_ARATH RecName: Full=Chloroplast processing peptidase; AltName: Full=Signal peptidase I-3; Flags: Precursor gb|AAU05529.1| At1g05140 [Arabidopsis thaliana] gb|AEE76927.1| chloroplast 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene21656 SustainPine v2.0 909
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene21727 SustainPine v2.0 851
AutoFact: Photosystem II 22 kDa protein, chloroplastic n=7 Tax=Solanaceae RepID=PSBS_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast chlorophyll a b-binding protein 0.0
Putative N-terminus
sp_v2.0_unigene21942 SustainPine v2.0 676
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic n=3 Tax=Arabidopsis RepID=G3PB_ARATH 4.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 5.59134e-40
C-terminus
sp_v2.0_unigene21983 SustainPine v2.0 1554
AutoFact: Chloroplast chaperonin 21 n=1 Tax=Vitis vinifera RepID=Q6B4V4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chaperonin 20 0.0
Complete
sp_v2.0_unigene22627 SustainPine v2.0 1157
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|O04616.1|Y4115_ARATH RecName: Full=Uncharacterized protein At4g01150, chloroplastic; Flags: Precursor gb|AAK63864.1|AF389292_1 AT4g01150/F2N1_18 [Arabidopsis thaliana] gb|AAB61025.1| A_IG002N01.18 gene pro 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain