Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chloroplast thylakoid membrane

Term: GO:0009535  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene16116 SustainPine v2.0 1319
AutoFact: FLU, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flourescent in blue light protein 0.0
Putative Complete
sp_v2.0_unigene16249 SustainPine v2.0 1834
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
Complete
sp_v2.0_unigene16732 SustainPine v2.0 1071
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene16886 SustainPine v2.0 1206
AutoFact: Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I n=5 Tax=Pinaceae RepID=Q07489_PINSY 0.0
FL-Next: tr=Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I; Pinus sylvestris (Scots pine). 0.0
Blast2go: chlorophyll a-b binding protein 4 precursor homolog 0.0
Complete
sp_v2.0_unigene16954 SustainPine v2.0 1102
AutoFact: PSI reaction center subunit II n=2 Tax=Citrus sinensis RepID=A8C172_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photosystem i reaction center subunit chloroplast 0.0
Complete
sp_v2.0_unigene16985 SustainPine v2.0 997
AutoFact: 10 kDa chaperonin n=5 Tax=core eudicotyledons RepID=CH10_ARATH 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 10 kda chaperonin 0.0
Complete
sp_v2.0_unigene16999 SustainPine v2.0 1075
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|O04616.1|Y4115_ARATH RecName: Full=Uncharacterized protein At4g01150, chloroplastic; Flags: Precursor gb|AAK63864.1|AF389292_1 AT4g01150/F2N1_18 [Arabidopsis thaliana] gb|AAB61025.1| A_IG002N01.18 gene pro 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
Complete
sp_v2.0_unigene17056 SustainPine v2.0 1211
AutoFact: Photosystem I reaction center subunit XI, chloroplastic n=2 Tax=Cucumis sativus RepID=PSAL_CUCSA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photosystem i reaction center subunit xi 0.0
Complete
sp_v2.0_unigene17071 SustainPine v2.0 1469
AutoFact: Type III chlorophyll a /b-binding protein n=2 Tax=Pinaceae RepID=Q02071_PINSY 0.0
FL-Next: tr=Type III chlorophyll a /b-binding protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: light-harvesting complex i chlorophyll a b binding protein 3 0.0
Complete
sp_v2.0_unigene17287 SustainPine v2.0 868
AutoFact: pfam06596, PsbX, Photosystem II reaction centre X protein (PsbX) 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ultraviolet-b-repressible protein 0.0
Complete
sp_v2.0_unigene17301 SustainPine v2.0 1496
AutoFact: ferredoxin-NADP+ reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 0.0
Complete
sp_v2.0_unigene17420 SustainPine v2.0 1180
AutoFact: Inner membrane protein PPF-1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SZE3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inner membrane protein 0.0
N-terminus
sp_v2.0_unigene17595 SustainPine v2.0 1184
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene17757 SustainPine v2.0 1021
AutoFact: glyceraldehyde-3-phosphate dehydrogenase [Marchantia polymorpha] 7.00649e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 0.0
C-terminus
sp_v2.0_unigene17835 SustainPine v2.0 1325
AutoFact: one-helix protein 2 [Arabidopsis thaliana] gb|AAG12539.1|AC015446_20 Unknown protein [Arabidopsis thaliana] gb|AAG12849.1|AC079286_6 photosystem II 22 kDa protein, putative; 13290-12539 [Arabidopsis thaliana] gb|AAK55677.1|AF378874_1 At1g34000/F12G12_210 9.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: one-helix protein 0.0
Complete
sp_v2.0_unigene18055 SustainPine v2.0 2437
AutoFact: chloroplast processing peptidase [Arabidopsis thaliana] sp|Q8H0W1.2|PLSP1_ARATH RecName: Full=Chloroplast processing peptidase; AltName: Full=Signal peptidase I-3; Flags: Precursor gb|AAU05529.1| At1g05140 [Arabidopsis thaliana] gb|AEE76927.1| chloroplast 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene18088 SustainPine v2.0 420
AutoFact: RecName: Full=Dynamin-related protein 12A; AltName: Full=Phragmoplastin; AltName: Full=Soybean dynamin-like protein 12A; Short=SDL12A gb|AAB05992.1| SDL12A [Glycine max] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 1e isoform 2 2.13443e-38
N-terminus
sp_v2.0_unigene18111 SustainPine v2.0 1789
AutoFact: Putative quinone-oxidoreductase homolog, chloroplastic n=3 Tax=Brassicaceae RepID=QORH_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: quinone-oxidoreductase-like protein 0.0
Complete
sp_v2.0_unigene18125 SustainPine v2.0 1048
AutoFact: DUF1118 domain containing protein 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at5g08050 f13g24_250 0.0
Complete
sp_v2.0_unigene18326 SustainPine v2.0 1311
AutoFact: Plastid-lipid-Associated Protein (Fragment) n=1 Tax=Nicotiana tabacum RepID=O24141_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid-lipid-associated protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain