Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene91363 SustainPine v2.0 708
AutoFact: Pseudo response regulator n=2 Tax=Populus RepID=B9N4C8_POPTR 5.99756e-43
FL-Next: tr=Response regulator 1; Pinus pinea (Italian stone pine). 0.0
Blast2go: timing of cab expression 1 0.0
Putative Complete
sp_v2.0_unigene91536 SustainPine v2.0 1167
AutoFact: triacylglycerol lipase 1 [Arabidopsis thaliana] sp|Q71DJ5.1|LIP1_ARATH RecName: Full=Triacylglycerol lipase 1; Flags: Precursor gb|AAN77143.1| putative triacylglycerol/steryl ester hydrolase [Arabidopsis thaliana] gb|ABF58965.1| At2g15230 [Arabidopsis tha 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene91612 SustainPine v2.0 473
AutoFact: U1 snRNP-interacting 70 kDa protein n=1 Tax=Triticum aestivum RepID=Q2QKB6_WHEAT 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 4.2188e-27
N-terminus
sp_v2.0_unigene91709 SustainPine v2.0 1202
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 0.0
FL-Next: sp=Actin-related protein 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: actin related protein 0.0
Complete
sp_v2.0_unigene91776 SustainPine v2.0 680
AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MKG2_9ASPA 3.0e-39
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: c-x8-c-x5-c-x3-h type zn-finger 0.0
N-terminus
sp_v2.0_unigene91948 SustainPine v2.0 581
AutoFact: Putative U2 snRNP auxiliary factor (Fragment) n=1 Tax=Chenopodium rubrum RepID=Q1H8Q9_CHERU 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor u2af small subunit b 1.73016e-21
Internal
sp_v2.0_unigene91978 SustainPine v2.0 630
AutoFact: Alba DNA/RNA-binding protein [Arabidopsis thaliana] sp|O22969.1|Y2416_ARATH RecName: Full=Uncharacterized protein At2g34160 gb|AAB67633.1| expressed protein [Arabidopsis thaliana] gb|AAM60985.1| unknown [Arabidopsis thaliana] dbj|BAC42164.1| unknown prote 1.0e-39
FL-Next: sp=Uncharacterized protein At2g34160; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene92227 SustainPine v2.0 618
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
sp_v2.0_unigene92281 SustainPine v2.0 365
AutoFact: Putative U1 small nuclear ribonucleoprotein n=3 Tax=Oryza sativa RepID=Q94LP1_ORYSJ 8.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 1.3232e-22
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain