Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80370 SustainPine v2.0 333
AutoFact: prolyl oligopeptidase-like protein [Arabidopsis thaliana] gb|AEE29967.1| prolyl oligopeptidase-like protein [Arabidopsis thaliana] 1.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 2.11954e-33
Internal
sp_v2.0_unigene80476 SustainPine v2.0 496
AutoFact: KH_1 domain containing protein 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly -binding 0.0
C-terminus
sp_v2.0_unigene80532 SustainPine v2.0 970
AutoFact: Contains similarity to protein phosphatase 2C from Arabidopsis thaliana gb|AF085279. It contains a protein phosphatase 2C domain PF|00481 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 0.0
Putative Complete
sp_v2.0_unigene80560 SustainPine v2.0 700
AutoFact: Unassigned protein
FL-Next: Isoform Short of U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 0.0
Blast2go: u1 small nuclear ribonucleoprotein-70k 3.12438e-09
N-terminus
sp_v2.0_unigene80626 SustainPine v2.0 481
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RT23_RICCO 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 37 6.7157e-13
Putative N-terminus
sp_v2.0_unigene80767 SustainPine v2.0 215
AutoFact: 26S protease regulatory subunit 6a, putative n=2 Tax=Magnoliophyta RepID=B9RFB5_RICCO 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome regulatory particle triple-a atpase subunit5a 7.84902e-25
Internal
sp_v2.0_unigene80896 SustainPine v2.0 443
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_13.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U772_VITVI 2.0e-14
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Blast2go: embryonic flower 2 2.83447e-16
N-terminus
sp_v2.0_unigene81035 SustainPine v2.0 715
AutoFact: U2 auxiliary factor small subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u2 snrnp auxiliary small 0.0
N-terminus
sp_v2.0_unigene81044 SustainPine v2.0 277
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 1.0e-24
FL-Next: tr=Endosomal P24A protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: endosomal p24a protein 4.44004e-29
Internal
sp_v2.0_unigene81066 SustainPine v2.0 522
AutoFact: 26S proteasome regulatory subunit N9 [Arabidopsis thaliana] gb|AED95276.1| 26S proteasome regulatory subunit N9 [Arabidopsis thaliana] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
sp_v2.0_unigene81259 SustainPine v2.0 307
AutoFact: RPN9 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q076B1_NICBE 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 13 3.54208e-31
C-terminus
sp_v2.0_unigene81328 SustainPine v2.0 896
AutoFact: Cysteine protease, putative n=1 Tax=Ricinus communis RepID=B9RHA4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine proteinase rd19a 0.0
N-terminus
sp_v2.0_unigene81360 SustainPine v2.0 391
AutoFact: ssDNA-binding transcriptional regulator [Arabidopsis thaliana] gb|AAF43941.1|AC012188_18 Contains similarity to a hypothetical protein from Arabidopsis thaliana gb|AC002521.2. EST gb|AI995686 comes from this gene gb|AAG48815.1|AF332452_1 putative DNA-bind 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ssdna-binding transcriptional regulator 3.9852e-30
C-terminus
sp_v2.0_unigene81466 SustainPine v2.0 591
AutoFact: Probable aquaporin n=4 Tax=Picea RepID=O65045_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aquaporin 0.0
C-terminus
sp_v2.0_unigene81530 SustainPine v2.0 739
AutoFact: Calcium-binding protein n=1 Tax=Lotus japonicus RepID=Q9SCA1_LOTJA 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding protein 0.0
Putative Complete
sp_v2.0_unigene81540 SustainPine v2.0 698
AutoFact: Calmodulin-like protein 6 n=12 Tax=Arabidopsis RepID=CML6_ARATH 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding protein 5.2399e-21
C-terminus
sp_v2.0_unigene81678 SustainPine v2.0 427
AutoFact: cysteine proteinase precursor [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cysteine proteinase rd19a 0.0
Misassembled
sp_v2.0_unigene81730 SustainPine v2.0 524
AutoFact: RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein emb|CAA69934.1| G protein beta subunit-like [Medicago sativa subsp. x varia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding protein subunit beta-like protein 0.0
N-terminus
sp_v2.0_unigene81739 SustainPine v2.0 516
AutoFact: Calcium binding protein n=1 Tax=Pinus taeda RepID=O22429_PINTA 1.0e-31
FL-Next: tr=Calcium binding protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: polcalcin 1.1404e-39
Complete
sp_v2.0_unigene81988 SustainPine v2.0 476
AutoFact: [O] COG5272 Ubiquitin 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: neural precursor cell developmentally down-regulated 8 3.21036e-14
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain