Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene73702 SustainPine v2.0 358
AutoFact: sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] gb|AED95551.1| sister chromatid cohesion protein PDS5 [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: sister chromatid cohesion protein pds5 2.1172e-28
Internal
sp_v2.0_unigene74025 SustainPine v2.0 429
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sister chromatid cohesion protein pds5 4.08219e-10
Internal
sp_v2.0_unigene74077 SustainPine v2.0 401
AutoFact: kinesin 1 [Arabidopsis thaliana] sp|Q07970.1|ATK1_ARATH RecName: Full=Kinesin-1; AltName: Full=Kinesin-like protein A dbj|BAA01972.1| kinesin-like motor protein heavy chain [Arabidopsis thaliana] emb|CAA17546.1| kinesin-related protein katA [Arabidopsis t 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein 2.98953e-41
Complete
sp_v2.0_unigene74414 SustainPine v2.0 483
AutoFact: Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 n=2 Tax=Arabidopsis RepID=BAME1_ARATH 5.0e-35
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: receptor-like protein kinase 1.71239e-42
Putative C-terminus
sp_v2.0_unigene74520 SustainPine v2.0 249
AutoFact: E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] gb|ABJ17142.1| At1g55255 [Arabidopsis thaliana] gb|AEE33211.1| E3 ubiquitin-protein ligase BRE1-like 2 [Arabidopsis thaliana] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.08373e-25
C-terminus
sp_v2.0_unigene75003 SustainPine v2.0 285
AutoFact: Histidine containing phosphotransfer protein (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8R3I5_SELML 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine containing phosphotransfer protein 1.50386e-26
Putative C-terminus
sp_v2.0_unigene75140 SustainPine v2.0 337
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal
sp_v2.0_unigene75202 SustainPine v2.0 384
AutoFact: Putative lysine decarboxylase-like protein (Fragment) n=1 Tax=Cupressus sempervirens RepID=B1PIE2_9CONI 5.0e-16
FL-Next: sp=Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cytokinin riboside 5 -monophosphate phosphoribohydrolase log8 1.13719e-17
Putative C-terminus
sp_v2.0_unigene75586 SustainPine v2.0 299
AutoFact: actin-related protein 7 [Arabidopsis thaliana] sp|Q8L4Y5.1|ARP7_ARATH RecName: Full=Actin-related protein 7 gb|AAM53247.1|AF507915_1 actin-related protein 7 [Arabidopsis thaliana] gb|AAM20512.1| actin -like protein [Arabidopsis thaliana] tpg|DAA00028.1| T 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin related protein 9.70955e-30
Internal
sp_v2.0_unigene75618 SustainPine v2.0 268
AutoFact: transcription initiation factor TFIIH subunit H3 [Arabidopsis thaliana] gb|AAM61618.1| unknown [Arabidopsis thaliana] gb|ABE77412.1| At1g18340 [Arabidopsis thaliana] gb|AEE29705.1| transcription initiation factor TFIIH subunit H3 [Arabidopsis thaliana] 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiih subunit h3 7.96852e-23
C-terminus
sp_v2.0_unigene75918 SustainPine v2.0 342
AutoFact: CENP-C (Fragment) n=1 Tax=Glycine max RepID=Q66LH3_SOYBN 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cenp-c 8.10873e-19
Putative C-terminus
sp_v2.0_unigene76325 SustainPine v2.0 350
AutoFact: Small RNA 2'-O-methyltransferase n=3 Tax=Camelineae RepID=HEN1_ARATH 7.0e-07
FL-Next: sp=Small RNA 2'-O-methyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna methylase hua enhancer 1 3.64119e-09
N-terminus
sp_v2.0_unigene76359 SustainPine v2.0 378
AutoFact: Poly [ADP-ribose] polymerase 2 n=2 Tax=Arabidopsis RepID=PARP2_ARATH 9.0e-08
FL-Next: sp=Poly [ADP-ribose] polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: poly(adp-ribose) polymerase 8.80299e-09
C-terminus
sp_v2.0_unigene76588 SustainPine v2.0 323
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 4.0e-18
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic subunit 4.79491e-21
Internal
sp_v2.0_unigene76642 SustainPine v2.0 291
AutoFact: protein alfin-like 3 [Arabidopsis thaliana] emb|CAB87196.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAL32929.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAM47893.1| nucleic acid binding protein-like [Arabidopsis thal 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd finger family protein 9.92674e-21
N-terminus
sp_v2.0_unigene76873 SustainPine v2.0 662
AutoFact: NAC domain containing protein 2 [Arabidopsis thaliana] gb|AAF35417.1| putative jasmonic acid regulatory protein [Arabidopsis thaliana] dbj|BAB20600.1| AtNAC2 [Arabidopsis thaliana] dbj|BAB02380.1| jasmonic acid regulatory protein-like [Arabidopsis thalian 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nam-like protein 0.0
N-terminus
sp_v2.0_unigene76904 SustainPine v2.0 963
AutoFact: AP2/ERF domain-containing transcription factor n=1 Tax=Populus trichocarpa RepID=B9IKF6_POPTR 5.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ap2 erf domain-containing transcription factor 0.0
Complete
sp_v2.0_unigene76982 SustainPine v2.0 866
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding protein 0.0
C-terminus
sp_v2.0_unigene77021 SustainPine v2.0 425
AutoFact: RecName: Full=Phosphoglucomutase, cytoplasmic; Short=PGM; AltName: Full=Glucose phosphomutase gb|AAB41895.1| phosphoglucomutase [Mesembryanthemum crystallinum] 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglucomutase 5.02836e-11
Putative N-terminus
sp_v2.0_unigene77029 SustainPine v2.0 826
AutoFact: Putative F-box GID2 protein n=1 Tax=Selaginella moellendorffii RepID=A9LY18_SELML 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein gid2-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain