Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene600 SustainPine v2.0 1068
AutoFact: [J] COG5192 GTP-binding protein required for 40S ribosome biogenesis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosome biogenesis protein bms1 homolog 0.0
Internal
sp_v2.0_unigene608 SustainPine v2.0 364
AutoFact: Unassigned protein
Blast2go: predicted protein [Laccaria bicolor S238N-H82] 4.95003e-08
Coding
sp_v2.0_unigene614 SustainPine v2.0 3435
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
C-terminus
sp_v2.0_unigene617 SustainPine v2.0 1471
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: photomorphogenesis repressor protein 0.0
C-terminus
sp_v2.0_unigene619 SustainPine v2.0 1724
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
sp_v2.0_unigene621 SustainPine v2.0 1415
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arf6 0.0
C-terminus
sp_v2.0_unigene624 SustainPine v2.0 1646
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-type peptidase 0.0
Complete
sp_v2.0_unigene672 SustainPine v2.0 1361
AutoFact: Protein phosphatase 2C-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 10-like 0.0
Putative Complete
sp_v2.0_unigene683 SustainPine v2.0 1418
AutoFact: RecName: Full=Squamosa promoter-binding-like protein 7 emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa Indica Group] 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7-like 0.0
Putative Complete
sp_v2.0_unigene693 SustainPine v2.0 3730
AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase ii 0.0
N-terminus
sp_v2.0_unigene696 SustainPine v2.0 2817
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Putative Complete
sp_v2.0_unigene701 SustainPine v2.0 2229
AutoFact: splicing factor 3A subunit 3 [Arabidopsis thaliana] dbj|BAB09681.1| splicing factor 3a [Arabidopsis thaliana] gb|AAK64048.1| putative splicing factor 3a [Arabidopsis thaliana] gb|AAM44910.1| putative splicing factor 3a protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 3a subunit 3-like 0.0
Complete
sp_v2.0_unigene724 SustainPine v2.0 3124
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RJU4_RICCO 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: conserved peptide upstream open reading frame 37 0.0
Complete
sp_v2.0_unigene731 SustainPine v2.0 1354
AutoFact: dimethyladenosine transferase [Arabidopsis thaliana] gb|AAC62868.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAK64053.1| putative dimethyladenosine transferase [Arabidopsis thaliana] gb|AAM44912.1| putative dimethyladenosine transf 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dimethyladenosine transferase 0.0
Complete
sp_v2.0_unigene739 SustainPine v2.0 3172
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Complete
sp_v2.0_unigene750 SustainPine v2.0 2414
AutoFact: transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_849592.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] ref|NP_001030969.1| transcription initiation factor TFIID subunit D5 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Os01g0510800 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transcription initiation factor tfiid subunit d5 0.0
Complete
sp_v2.0_unigene753 SustainPine v2.0 2242
AutoFact: DUF3537 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene760 SustainPine v2.0 1722
AutoFact: MADS-box protein n=7 Tax=Pinaceae RepID=A0S6W4_9CONI 0.0
FL-Next: tr=MADS box transcription factor; Pinus resinosa (Red pine) (Norway pine). 0.0
Blast2go: mads-box transcription factor 0.0
Complete
sp_v2.0_unigene762 SustainPine v2.0 2468
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene806 SustainPine v2.0 2290
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain