Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3411 SustainPine v2.0 2266
AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein damaged dna-binding 2 0.0
Complete
sp_v2.0_unigene3470 SustainPine v2.0 1356
AutoFact: PAF1 complex component n=1 Tax=Populus trichocarpa RepID=B9HUU3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: rna polymerase ii assessory factor cdc73p 0.0
C-terminus
sp_v2.0_unigene3473 SustainPine v2.0 1405
AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hiv tat-specific factor 1 homolog 0.0
N-terminus
sp_v2.0_unigene3481 SustainPine v2.0 1058
AutoFact: LOB domain-containing protein 27 [Arabidopsis thaliana] sp|Q9STS6.1|LBD27_ARATH RecName: Full=LOB domain-containing protein 27; AltName: Full=ASYMMETRIC LEAVES 2-like protein 29; Short=AS2-like protein 29 emb|CAB41870.1| putative protein [Arabidopsis thal 1.0e-27
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 9.33433e-41
Complete
sp_v2.0_unigene3485 SustainPine v2.0 1119
AutoFact: cell division control protein 45 [Arabidopsis thaliana] dbj|BAB02068.1| CDC45 (cell division cycle 45) -like protein [Arabidopsis thaliana] emb|CAD43725.1| putative cell division cyle protein 45 [Arabidopsis thaliana] gb|AEE76979.1| cell division control 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cell division control protein 45 homolog 0.0
Putative C-terminus
sp_v2.0_unigene3544 SustainPine v2.0 2233
AutoFact: Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] gb|AEE30875.1| Interferon-related developmental regulator domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: interferon-related developmental regulator domain-containing protein 0.0
Complete
sp_v2.0_unigene3577 SustainPine v2.0 1807
AutoFact: Os12g0256300 protein n=6 Tax=Oryza sativa RepID=Q2QUQ9_ORYSJ 0.0
FL-Next: tr=Putative pre-mRNA-splicing factor cwc-22; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: pre-mrna-splicing factor cwc-22 0.0
Putative C-terminus
sp_v2.0_unigene3591 SustainPine v2.0 1002
AutoFact: cyclin-dependent kinases regulatory subunit [Glycine max] gb|ACU14766.1| unknown [Glycine max] 8.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinases regulatory subunit 0.0
Complete
sp_v2.0_unigene3610 SustainPine v2.0 1781
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
sp_v2.0_unigene3614 SustainPine v2.0 1162
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=Putative uncharacterized protein At2g37520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene3628 SustainPine v2.0 2670
AutoFact: Inducer of CBF expression 1 (Fragment) n=1 Tax=Picea abies RepID=B2KZF3_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 0.0
Complete
sp_v2.0_unigene3635 SustainPine v2.0 1165
AutoFact: putative DnaJ protein [Camellia sinensis] 6.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein binding protein 0.0
Complete
sp_v2.0_unigene3643 SustainPine v2.0 1480
AutoFact: RecName: Full=Pirin-like protein gb|AAF22236.1|AF154003_1 pirin [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pirin-like protein 0.0
Complete
sp_v2.0_unigene3664 SustainPine v2.0 864
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
C-terminus
sp_v2.0_unigene3670 SustainPine v2.0 771
AutoFact: MYB transcription factor MYB172 n=1 Tax=Glycine max RepID=Q0PJF6_SOYBN 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 3.06115e-19
Complete
sp_v2.0_unigene3678 SustainPine v2.0 2413
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene3690 SustainPine v2.0 1541
AutoFact: centromere protein O [Arabidopsis thaliana] ref|NP_850804.1| centromere protein O [Arabidopsis thaliana] gb|AAN86147.1| unknown protein [Arabidopsis thaliana] gb|AED91585.1| centromere protein O [Arabidopsis thaliana] gb|AED91586.1| centromere protein O [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: centromere protein o 0.0
Complete
sp_v2.0_unigene3694 SustainPine v2.0 1687
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
Putative Complete
sp_v2.0_unigene3709 SustainPine v2.0 1297
AutoFact: TauD domain containing protein 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: clavaminate synthase-like protein at3g21360-like 0.0
Complete
sp_v2.0_unigene3719 SustainPine v2.0 1124
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Blast2go: transcription factor 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain