Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2754 SustainPine v2.0 1794
AutoFact: Nucleotide-sugar transporter family protein [Arabidopsis thaliana] ref|NP_001031992.1| Nucleotide-sugar transporter family protein [Arabidopsis thaliana] gb|AAM60900.1| CMP-sialic acid transporter-like protein [Arabidopsis thaliana] gb|AAO42302.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable udp-sugar transporter protein slc35a5-like 0.0
Complete
sp_v2.0_unigene2767 SustainPine v2.0 460
AutoFact: Putative calmodulin-binding protein similar to ER66 [Oryza sativa Japonica Group] gb|AAM08663.1|AC113338_19 Putative calmodulin binding protein similar to ER66 [Oryza sativa Japonica Group] 9.0e-16
FL-Next: sp=Calmodulin-binding transcription activator 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding transcription activator 4-like 1.57975e-16
N-terminus
sp_v2.0_unigene2795 SustainPine v2.0 2096
AutoFact: putative ABC transporter [Oryza sativa Japonica Group] gb|EEE59750.1| hypothetical protein OsJ_12218 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Putative ABC1 protein At2g40090; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter like protein 0.0
Complete
sp_v2.0_unigene2798 SustainPine v2.0 1236
AutoFact: MYB transcription factor n=1 Tax=Populus trichocarpa RepID=B9H191_POPTR 0.0
FL-Next: sp=Myb-related protein 308; Antirrhinum majus (Garden snapdragon). 0.0
Blast2go: myb-like transcription factor 1 0.0
Complete
sp_v2.0_unigene2820 SustainPine v2.0 1517
AutoFact: DUF947 domain containing protein 5.0e-34
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene2855 SustainPine v2.0 2012
AutoFact: TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] 0.0
FL-Next: sp=Transcription factor TGA5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor hbp-1b 0.0
Complete
sp_v2.0_unigene2863 SustainPine v2.0 894
AutoFact: tRNA/rRNA methyltransferase (SpoU) family protein n=3 Tax=Arabidopsis RepID=F4JP86_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna rrna methyltransferase family protein 0.0
Putative C-terminus
sp_v2.0_unigene2889 SustainPine v2.0 710
AutoFact: Unassigned protein
FL-Next: sp=RAN GTPase-activating protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleotide-binding oligomerization domain-containing protein 0.0
Internal
sp_v2.0_unigene2895 SustainPine v2.0 1209
AutoFact: protein Dr1-like protein [Arabidopsis thaliana] gb|AED93121.1| protein Dr1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
Complete
sp_v2.0_unigene2909 SustainPine v2.0 2130
AutoFact: R2r3-myb transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SHV5_RICCO 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: transcription factor gamyb-like 0.0
C-terminus
sp_v2.0_unigene2924 SustainPine v2.0 3222
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: minichromosome maintenance protein 0.0
Complete
sp_v2.0_unigene2945 SustainPine v2.0 3000
AutoFact: RNA recognition motif and CCHC-type zinc finger domain-containing protein [Arabidopsis thaliana] gb|AAL11606.1|AF424613_1 AT3g26420/F20C19_14 [Arabidopsis thaliana] dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana] gb|AAK96804.1| Unknown prot 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif family expressed 0.0
Complete
sp_v2.0_unigene2951 SustainPine v2.0 3185
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: minichromosome maintenance protein 2 0.0
Complete
sp_v2.0_unigene2971 SustainPine v2.0 1140
AutoFact: transcription factor, putative 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene2994 SustainPine v2.0 1865
AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor c subunit 5-like 0.0
Complete
sp_v2.0_unigene3028 SustainPine v2.0 1230
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Putative Complete
sp_v2.0_unigene3072 SustainPine v2.0 1999
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RAZ9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Complete
sp_v2.0_unigene3080 SustainPine v2.0 2591
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Complete
sp_v2.0_unigene3082 SustainPine v2.0 968
AutoFact: DNA-directed RNA polymerase n=1 Tax=Selaginella moellendorffii RepID=D8SDS6_SELML 0.0
FL-Next: sp=DNA-directed RNA polymerase II subunit RPB1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna polymerase i subunit rpa1-like 0.0
Internal
sp_v2.0_unigene3089 SustainPine v2.0 1777
AutoFact: pfam06217, GAGA_bind, GAGA binding protein-like family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic pentacysteine 6 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain