Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: nucleus

Term: GO:0005634  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2362 SustainPine v2.0 2385
AutoFact: myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] ref|NP_974298.1| myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] gb|AAK92826.1| unknown protein [Arabidopsis thaliana] gb|AAM20308.1| unknown protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator arr 0.0
Complete
sp_v2.0_unigene2363 SustainPine v2.0 1426
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly 0.0
C-terminus
sp_v2.0_unigene2386 SustainPine v2.0 2558
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh62-like 0.0
Complete
sp_v2.0_unigene2392 SustainPine v2.0 1963
AutoFact: putative DNA-binding protein [Arabidopsis thaliana] emb|CAB77810.1| putative DNA-binding protein [Arabidopsis thaliana] emb|CAD29664.1| homeodomain protein 14 [Arabidopsis thaliana] gb|ABH04479.1| At4g03250 [Arabidopsis thaliana] 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 0.0
Complete
sp_v2.0_unigene2394 SustainPine v2.0 3304
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Os05g0188500 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Putative C-terminus
sp_v2.0_unigene2436 SustainPine v2.0 2223
AutoFact: cyclin [Adiantum capillus-veneris] 0.0
FL-Next: Isoform 2 of Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2451 SustainPine v2.0 1660
AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 18-like 0.0
Complete
sp_v2.0_unigene2453 SustainPine v2.0 922
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 8.87998e-35
Internal
sp_v2.0_unigene2457 SustainPine v2.0 1811
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2478 SustainPine v2.0 1442
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative Complete
sp_v2.0_unigene2503 SustainPine v2.0 1647
AutoFact: Methylthioribose-1-phosphate isomerase n=1 Tax=Nicotiana tabacum RepID=MTNA_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methylthioribose-1-phosphate isomerase 0.0
Complete
sp_v2.0_unigene2510 SustainPine v2.0 985
AutoFact: PGAP1 domain containing protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100247423 0.0
C-terminus
sp_v2.0_unigene2514 SustainPine v2.0 898
AutoFact: APETALA2-related transcription factor 2 n=1 Tax=Picea abies RepID=Q9FV33_PICAB 0.0
FL-Next: tr=APETALA2-related transcription factor 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: af253971_1apetala2-related transcription factor 2 0.0
C-terminus
sp_v2.0_unigene2575 SustainPine v2.0 1910
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJS4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ilr3 0.0
Complete
sp_v2.0_unigene2632 SustainPine v2.0 1229
AutoFact: histone acetyltransferase type B catalytic subunit [Arabidopsis thaliana] sp|Q9FJT8.1|HATB_ARATH RecName: Full=Histone acetyltransferase type B catalytic subunit; Short=HAT B dbj|BAB09892.1| histone acetyltransferase HAT B [Arabidopsis thaliana] gb|ABF572 0.0
FL-Next: sp=Probable acetyltransferase type B catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histone acetyltransferase type b catalytic subunit 0.0
N-terminus
sp_v2.0_unigene2665 SustainPine v2.0 1170
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Putative Complete
sp_v2.0_unigene2672 SustainPine v2.0 1592
AutoFact: THO complex subunit 6 [Arabidopsis thaliana] sp|Q8L4M1.1|DWA1_ARATH RecName: Full=WD repeat-containing protein DWA1; AltName: Full=Protein DWD HYPERSENSITIVE TO ABA 1 gb|AAM20569.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91279.1| putat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd-40 repeat protein 0.0
Putative Complete
sp_v2.0_unigene2689 SustainPine v2.0 1249
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt2-like 0.0
Complete
sp_v2.0_unigene2694 SustainPine v2.0 972
AutoFact: bHLH transcription factor, putative [Brassica oleracea] 6.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.75086e-34
Internal
sp_v2.0_unigene2752 SustainPine v2.0 691
AutoFact: transcription cofactor, putative; K04498 E1A/CREB-binding protein [EC:2.3.1.48] 7.9874e-44
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain