Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Ubiquitin--protein ligase.

Term: EC:6.3.2.19  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene2352 SustainPine v2.0 2726
• AutoFact: KAP multi-domain protein 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 4-like 0.0
C-terminus
sp_v2.0_unigene2502 SustainPine v2.0 2036
• AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Complete
sp_v2.0_unigene2578 SustainPine v2.0 1993
• AutoFact: F-box protein FBW2 [Arabidopsis thaliana] ref|NP_849346.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_974523.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001078359.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001154215.1| F-box protein 0.0
• FL-Next: sp=F-box protein FBW2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein fbw2 0.0
Complete
sp_v2.0_unigene2624 SustainPine v2.0 2505
• AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein pub13 0.0
C-terminus
sp_v2.0_unigene2735 SustainPine v2.0 2435
• AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RC56_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase 0.0
Complete
sp_v2.0_unigene2743 SustainPine v2.0 1591
• AutoFact: Unassigned protein
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene2750 SustainPine v2.0 993
• AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
• FL-Next: sp=Probable ubiquitin-conjugating enzyme E2 23; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
Internal
sp_v2.0_unigene3464 SustainPine v2.0 1472
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 30-like 0.0
C-terminus
sp_v2.0_unigene3498 SustainPine v2.0 496
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_58.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SR46_VITVI 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 3-like 0.0
Internal
sp_v2.0_unigene3630 SustainPine v2.0 3272
• AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
• Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene3681 SustainPine v2.0 1169
• AutoFact: E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] ref|NP_001030850.1| E3 ubiquitin-protein ligase UPL7 [Arabidopsis thaliana] sp|Q9SCQ2.1|UPL7_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL7; Short=Ubiquitin-protein ligase 7 emb|CAB64212.1| put 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl7 0.0
Putative Complete
sp_v2.0_unigene3890 SustainPine v2.0 498
• AutoFact: E3 ubiquitin protein ligase DRIP2 n=2 Tax=Arabidopsis RepID=DRIP2_ARATH 7.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin protein ligase drip2 2.94273e-44
C-terminus
sp_v2.0_unigene3949 SustainPine v2.0 449
• AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 8.60706e-23
Internal
sp_v2.0_unigene4478 SustainPine v2.0 1428
• AutoFact: Ubiquitin-protein ligase, PUB12 n=2 Tax=Selaginella moellendorffii RepID=D8R4N0_SELML 1.4013e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arm protein 0.0
C-terminus
sp_v2.0_unigene5039 SustainPine v2.0 759
• AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u-box domain-containing protein 30-like 0.0
N-terminus
sp_v2.0_unigene5084 SustainPine v2.0 884
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 1.0e-17
• FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
• Blast2go: protein 3.38845e-27
N-terminus
sp_v2.0_unigene5111 SustainPine v2.0 1500
• AutoFact: KAP multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene5422 SustainPine v2.0 655
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box lrr-repeat protein 14 0.0
Putative N-terminus
sp_v2.0_unigene5460 SustainPine v2.0 1296
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T7C4_RICCO 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
N-terminus
sp_v2.0_unigene6214 SustainPine v2.0 883
• AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain