Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene25 SustainPine v2.0 1910
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SGW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb-cc type transfactor 0.0
Complete
sp_v2.0_unigene44 SustainPine v2.0 3071
AutoFact: putative replication licensing factor MCM4 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna replication licensing factor mcm4 0.0
Complete
sp_v2.0_unigene46 SustainPine v2.0 2878
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 3.1703e-41
Complete
sp_v2.0_unigene53 SustainPine v2.0 3307
AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene68 SustainPine v2.0 1803
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SRS4_RICCO 2.0e-39
FL-Next: sp=B3 domain-containing protein Os07g0679700; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 3.53968e-42
C-terminus
sp_v2.0_unigene103 SustainPine v2.0 1646
AutoFact: Transcription factor MYB251 n=1 Tax=Fagus crenata RepID=B5UAQ2_FAGCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt2-like 0.0
Complete
sp_v2.0_unigene174 SustainPine v2.0 1555
AutoFact: AP2-related transcription factor AP2L3 (Fragment) n=2 Tax=Picea RepID=Q106U2_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apetala2-like protein 0.0
Complete
sp_v2.0_unigene240 SustainPine v2.0 2084
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
C-terminus
sp_v2.0_unigene249 SustainPine v2.0 1185
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0T3_RICCO 2.0e-32
FL-Next: sp=Dof zinc finger protein DOF2.3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dof zinc finger protein 8.13057e-36
Complete
sp_v2.0_unigene261 SustainPine v2.0 2140
AutoFact: transcription factor TCP4 [Arabidopsis thaliana] ref|NP_850589.1| transcription factor TCP4 [Arabidopsis thaliana] ref|NP_001189896.1| transcription factor TCP4 [Arabidopsis thaliana] sp|Q8LPR5.1|TCP4_ARATH RecName: Full=Transcription factor TCP4; AltName 9.0e-34
FL-Next: sp=Transcription factor TCP4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor tcp4 4.49701e-39
Complete
sp_v2.0_unigene282 SustainPine v2.0 2299
AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Complete
sp_v2.0_unigene359 SustainPine v2.0 1548
AutoFact: AINTEGUMENTA-like protein n=1 Tax=Pinus thunbergii RepID=Q76H96_PINTH 0.0
FL-Next: tr=AINTEGUMENTA-like protein; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
C-terminus
sp_v2.0_unigene376 SustainPine v2.0 2662
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
Complete
sp_v2.0_unigene401 SustainPine v2.0 1981
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Putative Complete
sp_v2.0_unigene416 SustainPine v2.0 2965
AutoFact: DNA polymerase delta catalytic subunit n=6 Tax=Poaceae RepID=DPOD1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase delta subunit 1 0.0
Complete
sp_v2.0_unigene421 SustainPine v2.0 2069
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: sp=UPF0051 protein ABCI8, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g04770 t4b21_16 0.0
Complete
sp_v2.0_unigene450 SustainPine v2.0 2518
AutoFact: AP2 domain-containing transcription factor 7 n=1 Tax=Glycine max RepID=C9WA65_SOYBN 2.0e-31
FL-Next: tr=DREB protein; Taxus cuspidata (Japanese yew). 0.0
Blast2go: dehydration responsive element binding protein 7.17662e-34
Putative Complete
sp_v2.0_unigene462 SustainPine v2.0 1294
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
C-terminus
sp_v2.0_unigene464 SustainPine v2.0 1335
AutoFact: pfam02037, SAP, SAP domain 1.0e-08
FL-Next: sp=Zinc finger CCCH domain-containing protein 62; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 0.0
Putative N-terminus
sp_v2.0_unigene475 SustainPine v2.0 2241
AutoFact: transcription factor, putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator arr 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain