Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2451 SustainPine v2.0 1660
AutoFact: Putative auxin response factor 10/16/17 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY1_CYCRU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor 18-like 0.0
Complete
sp_v2.0_unigene2457 SustainPine v2.0 1811
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2464 SustainPine v2.0 867
AutoFact: putative mitotic arrest defective protein 2B [Oryza sativa Japonica Group] gb|EEE55135.1| hypothetical protein OsJ_02922 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic spindle assembly checkpoint protein mad2b 0.0
Complete
sp_v2.0_unigene2510 SustainPine v2.0 985
AutoFact: PGAP1 domain containing protein 9.0e-05
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein loc100247423 0.0
C-terminus
sp_v2.0_unigene2514 SustainPine v2.0 898
AutoFact: APETALA2-related transcription factor 2 n=1 Tax=Picea abies RepID=Q9FV33_PICAB 0.0
FL-Next: tr=APETALA2-related transcription factor 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: af253971_1apetala2-related transcription factor 2 0.0
C-terminus
sp_v2.0_unigene2526 SustainPine v2.0 3193
AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding 0.0
Complete
sp_v2.0_unigene2588 SustainPine v2.0 967
AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah-phd domain-containing protein 0.0
Complete
sp_v2.0_unigene2689 SustainPine v2.0 1249
AutoFact: transcription factor DcMYB3-1 [Daucus carota] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor tt2-like 0.0
Complete
sp_v2.0_unigene2798 SustainPine v2.0 1236
AutoFact: MYB transcription factor n=1 Tax=Populus trichocarpa RepID=B9H191_POPTR 0.0
FL-Next: sp=Myb-related protein 308; Antirrhinum majus (Garden snapdragon). 0.0
Blast2go: myb-like transcription factor 1 0.0
Complete
sp_v2.0_unigene2800 SustainPine v2.0 1631
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
C-terminus
sp_v2.0_unigene2808 SustainPine v2.0 1460
AutoFact: No apical meristem-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZFA1_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: no apical meristem-like protein 0.0
Complete
sp_v2.0_unigene2909 SustainPine v2.0 2130
AutoFact: R2r3-myb transcription factor, putative n=1 Tax=Ricinus communis RepID=B9SHV5_RICCO 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB5; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: transcription factor gamyb-like 0.0
C-terminus
sp_v2.0_unigene2924 SustainPine v2.0 3222
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: minichromosome maintenance protein 0.0
Complete
sp_v2.0_unigene2926 SustainPine v2.0 3231
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
sp_v2.0_unigene2951 SustainPine v2.0 3185
AutoFact: minichromosomal maintenance factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: minichromosome maintenance protein 2 0.0
Complete
sp_v2.0_unigene2971 SustainPine v2.0 1140
AutoFact: transcription factor, putative 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene3044 SustainPine v2.0 1689
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zf-hd homeobox protein at4g24660-like 0.0
Complete
sp_v2.0_unigene3080 SustainPine v2.0 2591
AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Complete
sp_v2.0_unigene3111 SustainPine v2.0 1869
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Complete
sp_v2.0_unigene3127 SustainPine v2.0 1118
AutoFact: YABBY2 like protein [Ruscus aculeatus] 4.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain