Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1972 SustainPine v2.0 1067
AutoFact: Zinc finger-homeodomain protein 1 n=1 Tax=Welwitschia mirabilis RepID=B0LK07_WELMI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger-homeodomain protein 1 0.0
C-terminus
sp_v2.0_unigene1986 SustainPine v2.0 889
AutoFact: BZIP domain class transcription factor n=2 Tax=Malus x domestica RepID=D9ZIQ3_MALDO 2.0e-38
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: bzip transcription factor 1.4013e-45
N-terminus
sp_v2.0_unigene2018 SustainPine v2.0 1977
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
C-terminus
sp_v2.0_unigene2084 SustainPine v2.0 1966
AutoFact: NAC, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Complete
sp_v2.0_unigene2148 SustainPine v2.0 1269
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
N-terminus
sp_v2.0_unigene2149 SustainPine v2.0 1171
AutoFact: APETALA2-related transcription factor 2 n=1 Tax=Picea abies RepID=Q9FV33_PICAB 0.0
FL-Next: tr=APETALA2-related transcription factor 2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ap2 domain-containing transcription factor 0.0
Putative N-terminus
sp_v2.0_unigene2163 SustainPine v2.0 1847
AutoFact: replication factor C 38 kDa subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene2189 SustainPine v2.0 1685
AutoFact: RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates chromatin transcription complex subunit SSRP1; AltName: Full=Recombination signal sequence recognition protein 1 emb|CAA66480.1| transcription factor [Vicia faba var. minor] 0.0
FL-Next: sp=FACT complex subunit SSRP1; Vicia faba (Broad bean) (Faba vulgaris). 0.0
Blast2go: fact complex subunit ssrp1 0.0
N-terminus
sp_v2.0_unigene2253 SustainPine v2.0 1161
AutoFact: R2R3-MYB transcription factor MYB22 (Fragment) n=1 Tax=Pinus taeda RepID=C0JTE2_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: myb transcription factor 0.0
Complete
sp_v2.0_unigene2275 SustainPine v2.0 1067
AutoFact: Putative DNA-binding protein n=2 Tax=Arabidopsis thaliana RepID=O81047_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein smubp-2-like 0.0
C-terminus
sp_v2.0_unigene2290 SustainPine v2.0 2376
AutoFact: SEUSS transcriptional co-regulator [Arabidopsis thaliana] ref|NP_001117434.1| SEUSS transcriptional co-regulator [Arabidopsis thaliana] sp|Q8W234.1|SEUSS_ARATH RecName: Full=Transcriptional corepressor SEUSS gb|AAL57277.1| SEUSS transcriptional co-regulat 0.0
FL-Next: sp=Transcriptional corepressor SEUSS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor seuss-like 0.0
Putative C-terminus
sp_v2.0_unigene2331 SustainPine v2.0 1373
AutoFact: Transcription initiation factor TFIID, subunit TAF1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKZ9_PHYPA 0.0
FL-Next: sp=Transcription initiation factor TFIID subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transcription initiation factor subunit taf1 0.0
Internal
sp_v2.0_unigene2362 SustainPine v2.0 2385
AutoFact: myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] ref|NP_974298.1| myb-like HTH transcriptional regulator family protein [Arabidopsis thaliana] gb|AAK92826.1| unknown protein [Arabidopsis thaliana] gb|AAM20308.1| unknown protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: two-component response regulator arr 0.0
Complete
sp_v2.0_unigene2363 SustainPine v2.0 1426
AutoFact: putative poly (ADP-ribose) polymerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly 0.0
C-terminus
sp_v2.0_unigene2379 SustainPine v2.0 2819
AutoFact: exocyst complex component 5 [Arabidopsis thaliana] ref|NP_568270.3| exocyst complex component 5 [Arabidopsis thaliana] sp|Q8RVQ5.2|EXOC5_ARATH RecName: Full=Exocyst complex component 5; AltName: Full=Exocyst complex component Sec10 dbj|BAD95324.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exocyst complex component 5 0.0
Complete
sp_v2.0_unigene2388 SustainPine v2.0 1017
AutoFact: YAB5-like YABBY protein (Fragment) n=2 Tax=Cabomba caroliniana RepID=E9RFE5_CABCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yabby2 like protein 0.0
Complete
sp_v2.0_unigene2393 SustainPine v2.0 1009
AutoFact: Transcription factor bHLH30 n=2 Tax=Arabidopsis RepID=BH030_ARATH 6.0e-16
FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh30 3.75105e-17
C-terminus
sp_v2.0_unigene2394 SustainPine v2.0 3304
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Os05g0188500 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Putative C-terminus
sp_v2.0_unigene2411 SustainPine v2.0 997
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Blast2go: transcription factor tfiid 0.0
Complete
sp_v2.0_unigene2433 SustainPine v2.0 1288
AutoFact: DNA polymerase I n=3 Tax=Andropogoneae RepID=B4FJZ1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain