Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA binding

Term: GO:0003677  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene59928 SustainPine v2.0 333
AutoFact: 5'-3' exonuclease family protein n=4 Tax=Arabidopsis RepID=Q94A33_ARATH 1.0e-32
FL-Next: sp=Exonuclease 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 4.29358e-42
Internal
sp_v2.0_unigene59961 SustainPine v2.0 904
AutoFact: [K] COG5068 Regulator of arginine metabolism and related MADS box-containing transcription factors 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor 0.0
Complete
sp_v2.0_unigene61406 SustainPine v2.0 969
AutoFact: high mobility group B3 protein [Arabidopsis thaliana] sp|P93047.1|HMGB3_ARATH RecName: Full=High mobility group B protein 3; AltName: Full=High mobility group protein B 2; Short=AtHMGbeta2; Short=HMG beta 2; AltName: Full=Nucleosome/chromatin assembly fac 5.0e-12
FL-Next: sp=High mobility group B protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: high mobility group family 8.98127e-21
Complete
sp_v2.0_unigene61757 SustainPine v2.0 644
AutoFact: Purple acid phosphatase 3 n=3 Tax=Arabidopsis RepID=PPA3_ARATH 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: purple acid phosphatase 0.0
Internal
sp_v2.0_unigene63678 SustainPine v2.0 774
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
N-terminus
sp_v2.0_unigene64284 SustainPine v2.0 403
AutoFact: Purple acid phosphatase 3 n=3 Tax=Arabidopsis RepID=PPA3_ARATH 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: purple acid phosphatase 0.0
Internal
sp_v2.0_unigene64887 SustainPine v2.0 348
AutoFact: ABC transporter 1-like protein [Rhodiola fastigiata] 6.0e-15
FL-Next: sp=ABC transporter F family member 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family protein 6.90493e-17
Internal
sp_v2.0_unigene66732 SustainPine v2.0 202
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor ice1 1.06499e-25
Internal
sp_v2.0_unigene69885 SustainPine v2.0 397
AutoFact: pfam00046, Homeobox, Homeobox domain 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox-leucine zipper family protein 5.89725e-13
N-terminus
sp_v2.0_unigene70134 SustainPine v2.0 353
AutoFact: Cleavage and polyadenylation specificity factor, putative n=1 Tax=Ricinus communis RepID=B9RVY3_RICCO 3.0e-33
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor 5.43803e-33
Internal
sp_v2.0_unigene71436 SustainPine v2.0 300
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 3.0e-07
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 5.66989e-10
Internal
sp_v2.0_unigene75140 SustainPine v2.0 337
AutoFact: Ethylene-insensitive 3d n=2 Tax=Populus trichocarpa RepID=B9HK87_POPTR 6.0e-38
FL-Next: sp=Protein ETHYLENE INSENSITIVE 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ethylene insensitive 3-like 4.2039e-45
Internal
sp_v2.0_unigene77312 SustainPine v2.0 587
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 8.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.29506e-28
Complete
sp_v2.0_unigene78681 SustainPine v2.0 457
AutoFact: RecName: Full=Phosphoenolpyruvate carboxykinase [ATP] 1 gb|AAA79122.1| phosphoenolpyruvate carboxykinase [Urochloa panicoides] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 8.40779e-45
Putative Complete
sp_v2.0_unigene80278 SustainPine v2.0 402
AutoFact: two-component response regulator-like APRR7 [Arabidopsis thaliana] sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName: Full=Pseudo-response regulator 7 dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thalia 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sensory transduction histidine 2.42775e-27
Internal
sp_v2.0_unigene80306 SustainPine v2.0 443
AutoFact: Ethylene-responsive transcription factor 4 n=4 Tax=Nicotiana RepID=ERF4_NICSY 8.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1.30218e-14
N-terminus
sp_v2.0_unigene82614 SustainPine v2.0 861
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 6.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b2 protein 0.0
Complete
sp_v2.0_unigene82713 SustainPine v2.0 1126
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b2 protein 8.71655e-36
Putative Complete
sp_v2.0_unigene82874 SustainPine v2.0 349
AutoFact: Putative wuschel homeobox protein WOX8/9 n=1 Tax=Picea abies RepID=D5LMH9_PICAB 7.0e-13
FL-Next: tr=Putative wuschel homeobox protein WOX8/9; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: compound inflorescence 2.42469e-15
N-terminus
sp_v2.0_unigene83028 SustainPine v2.0 523
AutoFact: DNA-binding protein MNB1B, putative n=1 Tax=Ricinus communis RepID=B9SQ35_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group protein b1 3.01313e-20
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain