Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: mRNA processing

Term: GO:0006397  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene38408 SustainPine v2.0 528
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
sp_v2.0_unigene54799 SustainPine v2.0 480
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 2.0e-12
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 3.20413e-14
N-terminus
sp_v2.0_unigene58063 SustainPine v2.0 417
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.8333e-36
Internal
sp_v2.0_unigene59088 SustainPine v2.0 178
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 6.0e-12
• FL-Next: sp=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 6.67045e-17
Internal
sp_v2.0_unigene61968 SustainPine v2.0 580
• AutoFact: Serine/threonine-protein kinase AFC2 n=4 Tax=Arabidopsis RepID=AFC2_ARATH 8.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 4.17167e-42
N-terminus
sp_v2.0_unigene63568 SustainPine v2.0 1102
• AutoFact: serine/threonine-protein kinase AFC2 [Arabidopsis thaliana] gb|AEE84950.1| serine/threonine-protein kinase AFC2 [Arabidopsis thaliana] 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
C-terminus
sp_v2.0_unigene69611 SustainPine v2.0 399
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
sp_v2.0_unigene74896 SustainPine v2.0 335
• AutoFact: Protein kinase MK5 n=1 Tax=Mesembryanthemum crystallinum RepID=Q9M598_MESCR 8.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase afc2 7.2171e-33
Putative Complete
sp_v2.0_unigene76787 SustainPine v2.0 1236
• AutoFact: Serine/threonine-protein kinase AFC2 n=4 Tax=Arabidopsis RepID=AFC2_ARATH 4.00001e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Complete
sp_v2.0_unigene79597 SustainPine v2.0 393
• AutoFact: Afc, putative n=1 Tax=Ricinus communis RepID=B9T436_RICCO 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase afc2-like 0.0
Internal
sp_v2.0_unigene79926 SustainPine v2.0 373
• AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 6.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 1.03072e-09
N-terminus
sp_v2.0_unigene79971 SustainPine v2.0 395
• AutoFact: splicing factor 3B subunit 5 [Arabidopsis thaliana] sp|P58728.1|SF3BB_ARATH RecName: Full=Uncharacterized protein At4g14342 gb|AAL36377.1| unknown protein [Arabidopsis thaliana] gb|AAM67534.1| unknown protein [Arabidopsis thaliana] dbj|BAC43291.1| unknown 3.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: splicing factor 3b subunit 5 0.0
Putative Complete
sp_v2.0_unigene80476 SustainPine v2.0 496
• AutoFact: KH_1 domain containing protein 2.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: poly -binding 0.0
C-terminus
sp_v2.0_unigene82128 SustainPine v2.0 374
• AutoFact: Afc, putative n=1 Tax=Ricinus communis RepID=B9SVN5_RICCO 5.99756e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
sp_v2.0_unigene82265 SustainPine v2.0 485
• AutoFact: Protein kinase MK5 n=1 Tax=Mesembryanthemum crystallinum RepID=Q9M598_MESCR 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 9.37664e-25
C-terminus
sp_v2.0_unigene85534 SustainPine v2.0 503
• AutoFact: PK12 protein kinase [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase afc2 0.0
Internal
sp_v2.0_unigene86164 SustainPine v2.0 695
• AutoFact: Ferrochelatase n=1 Tax=Solanum tuberosum RepID=O64391_SOLTU 0.0
• FL-Next: sp=Ferrochelatase-2, chloroplastic; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: ferrochelatase- chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain