Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene80193 SustainPine v2.0 569
AutoFact: PREDICTED: 40S ribosomal protein S14-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AD71F 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s14 1.03528e-41
C-terminus
sp_v2.0_unigene80326 SustainPine v2.0 391
AutoFact: Beta-galactosidase n=3 Tax=Populus RepID=B9MWS0_POPTR 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta galactosidase 1 4.54869e-19
C-terminus
sp_v2.0_unigene80356 SustainPine v2.0 497
AutoFact: sucrose nonfermenting 4-like protein [Arabidopsis thaliana] gb|AAL27498.1|AF439826_1 At1g09020/F7G19_11 [Arabidopsis thaliana] gb|AAN18191.1| At1g09020/F7G19_11 [Arabidopsis thaliana] gb|ABA12450.1| AKINbetagamma [Arabidopsis thaliana] gb|AEE28383.1| sucr 3.00018e-42
FL-Next: sp=Sucrose nonfermenting 4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sucrose nonfermenting 4-like isoform 1 7.10458e-43
Internal
sp_v2.0_unigene80361 SustainPine v2.0 383
AutoFact: Polyubiquitin 9 n=1 Tax=Arabidopsis thaliana RepID=UBQ9_ARATH 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyubiquitin 9 8.75533e-30
C-terminus
sp_v2.0_unigene80402 SustainPine v2.0 403
AutoFact: 60 kDa chaperonin beta subunit n=4 Tax=Poaceae RepID=Q6ZFJ9_ORYSJ 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tcp-1 cpn60 chaperonin family protein 1.16119e-15
Internal
sp_v2.0_unigene80414 SustainPine v2.0 407
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b like protein 0.0
C-terminus
sp_v2.0_unigene80439 SustainPine v2.0 1206
AutoFact: DAG protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SE52_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein mitochondrial-like 0.0
Complete
sp_v2.0_unigene80471 SustainPine v2.0 846
AutoFact: RecName: Full=Eukaryotic translation initiation factor 2 subunit beta; Short=eIF-2-beta; AltName: Full=P38 gb|AAB65774.1| eIF-2 beta subunit [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation initiation factor eif-2 beta subunit 0.0
N-terminus
sp_v2.0_unigene80560 SustainPine v2.0 700
AutoFact: Unassigned protein
FL-Next: Isoform Short of U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1 0.0
Blast2go: u1 small nuclear ribonucleoprotein-70k 3.12438e-09
N-terminus
sp_v2.0_unigene80620 SustainPine v2.0 375
AutoFact: Heat shock protein 82 n=20 Tax=Magnoliophyta RepID=HSP82_MAIZE 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein 90 0.0
Internal
sp_v2.0_unigene80711 SustainPine v2.0 372
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 2.0e-11
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 3.43899e-12
C-terminus
sp_v2.0_unigene80793 SustainPine v2.0 444
AutoFact: porin [Prunus armeniaca] 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: porin voltage-dependent anion-selective channel protein 1.01166e-23
Internal
sp_v2.0_unigene80801 SustainPine v2.0 443
AutoFact: histone H4 [Hyacinthus orientalis] 7.0e-17
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.22608e-17
Putative Complete
sp_v2.0_unigene80896 SustainPine v2.0 443
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_13.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7U772_VITVI 2.0e-14
FL-Next: Isoform 2 of Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 0.0
Blast2go: embryonic flower 2 2.83447e-16
N-terminus
sp_v2.0_unigene80911 SustainPine v2.0 839
AutoFact: thioredoxin family protein [Arabidopsis thaliana] emb|CAB87763.1| putative protein [Arabidopsis thaliana] gb|AAN41366.1| unknown protein [Arabidopsis thaliana] gb|AED92004.1| thioredoxin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosducin-like protein 3 0.0
Putative Complete
sp_v2.0_unigene80916 SustainPine v2.0 488
AutoFact: vesicle-associated membrane protein 721 [Arabidopsis thaliana] sp|Q9ZTW3.1|VA721_ARATH RecName: Full=Vesicle-associated membrane protein 721; Short=AtVAMP721; AltName: Full=v-SNARE synaptobrevin 7B; Short=AtVAMP7B gb|AAC98905.1| vesicle-associated membran 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane protein 722 3.22608e-22
Putative C-terminus
sp_v2.0_unigene81028 SustainPine v2.0 465
AutoFact: DAG protein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SE52_RICCO 6.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dag chloroplast 0.0
N-terminus
sp_v2.0_unigene81091 SustainPine v2.0 882
AutoFact: putative protein kinase (AME2/AFC1) [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase afc1 0.0
C-terminus
sp_v2.0_unigene81255 SustainPine v2.0 413
AutoFact: Shaggy-related protein kinase 5 (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI6_PICAB 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.15836e-19
C-terminus
sp_v2.0_unigene81547 SustainPine v2.0 249
AutoFact: Eukaryotic initiation factor 4A-like protein n=2 Tax=Chlamydomonadales RepID=A8IP17_CHLRE 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translational initiation factor 4a-1 2.69929e-25
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain