Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: protein binding

Term: GO:0005515  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4208 SustainPine v2.0 1160
AutoFact: RecName: Full=Probable cleavage and polyadenylation specificity factor subunit 1; AltName: Full=Cleavage and polyadenylation specificity factor 160 kDa subunit; Short=CPSF 160 kDa subunit emb|CAD39979.2| OSJNBa0032B23.5 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Probable cleavage and polyadenylation specificity factor subunit 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 1-like 0.0
C-terminus
sp_v2.0_unigene4209 SustainPine v2.0 1038
AutoFact: SecY protein (Fragment) n=2 Tax=Malpighiales RepID=B9IM48_POPTR 0.0
FL-Next: sp=Preprotein translocase subunit secY, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: preprotein translocase subunit chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene4212 SustainPine v2.0 1897
AutoFact: SKP1-interacting partner 15 n=2 Tax=Arabidopsis RepID=SKI15_ARATH 0.0
FL-Next: sp=SKP1-interacting partner 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box family protein 0.0
Complete
sp_v2.0_unigene4227 SustainPine v2.0 943
AutoFact: DnaJ-domain-containing protein [Arabidopsis thaliana] gb|AEE74457.1| DnaJ-domain-containing protein [Arabidopsis thaliana] 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heat shock protein binding protein 2.78062e-40
Putative N-terminus
sp_v2.0_unigene4261 SustainPine v2.0 3022
AutoFact: putative poly(A) polymerase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Complete
sp_v2.0_unigene4327 SustainPine v2.0 766
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFZ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor gtpase-activating protein agd3 0.0
N-terminus
sp_v2.0_unigene4334 SustainPine v2.0 1660
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 5.99994e-41
FL-Next: sp=Nuclear-pore anchor; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleoprotein tpr 0.0
Internal
sp_v2.0_unigene4335 SustainPine v2.0 1010
AutoFact: putative calcium-binding protein CML18 [Arabidopsis thaliana] sp|Q9M8U1.1|CML18_ARATH RecName: Full=Probable calcium-binding protein CML18; AltName: Full=Calmodulin-15; Short=AtCaM-15; AltName: Full=Calmodulin-like protein 18 gb|AAF26959.1|AC018363_4 puta 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding protein cml18 0.0
Putative Complete
sp_v2.0_unigene4388 SustainPine v2.0 565
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 5.60519e-45
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
sp_v2.0_unigene4392 SustainPine v2.0 1547
AutoFact: DUF593 domain containing protein 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 4.90934e-32
Putative Complete
sp_v2.0_unigene4400 SustainPine v2.0 376
AutoFact: Unassigned protein
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional activator demeter-like 0.0
Internal
sp_v2.0_unigene4444 SustainPine v2.0 609
AutoFact: Protein ABIL1, putative n=1 Tax=Ricinus communis RepID=B9RDZ9_RICCO 7.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein abil1 0.0
Internal
sp_v2.0_unigene4477 SustainPine v2.0 1411
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 1.0e-11
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 7.47012e-18
Internal
sp_v2.0_unigene4488 SustainPine v2.0 2260
AutoFact: Isocitrate lyase n=1 Tax=Pinus taeda RepID=Q41084_PINTA 0.0
FL-Next: sp=Isocitrate lyase; Pinus taeda (Loblolly pine). 0.0
Blast2go: isocitrate lyase 0.0
Complete
sp_v2.0_unigene4495 SustainPine v2.0 3024
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene4497 SustainPine v2.0 2622
AutoFact: Calcium-dependent protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCK2_RICCO 0.0
FL-Next: sp=Calcium-dependent protein kinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calcium-dependent protein kinase 0.0
Complete
sp_v2.0_unigene4509 SustainPine v2.0 1777
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RMH5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u-box domain-containing protein 7 0.0
Complete
sp_v2.0_unigene4540 SustainPine v2.0 1988
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
Complete
sp_v2.0_unigene4562 SustainPine v2.0 1880
AutoFact: AP-2 complex subunit alpha, putative; K11824 AP-2 complex subunit alpha 0.0
FL-Next: Isoform 3 of AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
N-terminus
sp_v2.0_unigene4581 SustainPine v2.0 1751
AutoFact: Dynamin central region; Dynamin GTPase effector [Medicago truncatula] 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain