Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene20029 SustainPine v2.0 352
AutoFact: Polynucleotidyl transferase, Ribonuclease H fold (Fragment) n=1 Tax=Medicago truncatula RepID=A2Q4N7_MEDTR 1.0e-22
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.03831e-26
Internal
sp_v2.0_unigene20636 SustainPine v2.0 361
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q53JA0_ORYSJ 5.0e-08
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy sub-class 2.81172e-09
Internal
sp_v2.0_unigene21000 SustainPine v2.0 352
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q10LB6_ORYSJ 3.0e-05
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v2.0_unigene38122 SustainPine v2.0 383
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q109Z1_ORYSJ 3.0e-08
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 6.82953e-08
Internal
sp_v2.0_unigene40922 SustainPine v2.0 477
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=5 Tax=Oryza sativa RepID=Q2R1L3_ORYSJ 3.00004e-41
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 5.55685e-41
Internal
sp_v2.0_unigene44220 SustainPine v2.0 311
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2R1B6_ORYSJ 3.0e-16
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 2.17801e-20
Putative C-terminus
sp_v2.0_unigene68824 SustainPine v2.0 296
AutoFact: Unassigned protein
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v2.0_unigene70670 SustainPine v2.0 306
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=8 Tax=Oryza sativa RepID=Q2QR60_ORYSJ 3.0e-21
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 8.57647e-25
Internal
sp_v2.0_unigene71158 SustainPine v2.0 330
AutoFact: Retrotransposon protein, putative, Ty3-gypsy sub-class n=1 Tax=Oryza sativa Japonica Group RepID=Q53KI9_ORYSJ 5.0e-10
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 1.61374e-12
Internal
sp_v2.0_unigene73563 SustainPine v2.0 422
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=2 Tax=Oryza sativa Japonica Group RepID=Q2QYP3_ORYSJ 2.0e-05
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v2.0_unigene75746 SustainPine v2.0 317
AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QS58_ORYSJ 3.0e-11
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 3.6729e-13
Internal
sp_v2.0_unigene76315 SustainPine v2.0 440
AutoFact: Putative retroelement n=1 Tax=Oryza sativa RepID=Q94HU1_ORYSA 6.0e-06
FL-Next: tr=Retrotransposon protein, putative, Ty3-gypsy subclass; Oryza sativa subsp. japonica (Rice). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain