Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3292 SustainPine v2.0 1211
AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 0.0
C-terminus
sp_v2.0_unigene6460 SustainPine v2.0 398
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 3.0e-39
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 4.2039e-45
Internal
sp_v2.0_unigene7282 SustainPine v2.0 556
AutoFact: RNA-directed RNA polymerase-like, putative n=3 Tax=Solanum demissum RepID=Q6L447_SOLDE 1.0e-30
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 1.67319e-34
C-terminus
sp_v2.0_unigene32102 SustainPine v2.0 524
AutoFact: RNA-dependent RNA polymerase 1 n=3 Tax=Arabidopsis RepID=RDR1_ARATH 8.0e-15
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 1 1.4873e-14
Internal
sp_v2.0_unigene38254 SustainPine v2.0 493
AutoFact: RNA-dependent RNA polymerase n=3 Tax=Nicotiana RepID=C1I213_NICGU 0.0
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 0.0
Internal
sp_v2.0_unigene42569 SustainPine v2.0 517
AutoFact: RNA-dependent RNA polymerase n=2 Tax=Gossypium hirsutum RepID=B2B9K0_GOSHI 2.0e-35
FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 1 5.96813e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain