Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4600 SustainPine v2.0 1208
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
N-terminus
sp_v2.0_unigene9691 SustainPine v2.0 1883
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
C-terminus
sp_v2.0_unigene28291 SustainPine v2.0 1840
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Putative C-terminus
sp_v2.0_unigene28532 SustainPine v2.0 679
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 1 [Arabidopsis thaliana] sp|Q5YDB6.1|CPL1_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 1; Short=FCP-like 1; AltName: Full=Carboxyl-terminal phosphatase-like 1; Short=AtCPL1; 1.0e-06
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like isoform 2 4.47331e-09
C-terminus
sp_v2.0_unigene38644 SustainPine v2.0 232
AutoFact: sap92f01.y1 Gm-c1045 Glycine max cDNA clone SOYBEAN CLONE ID: Gm-c1045-2929 5' similar to TR:Q9SVT0 Q9SVT0 HYPOTHETICAL 111.8 KD PROTEIN. ;, mRNA sequence. 9.0e-14
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 6.43984e-18
Internal
sp_v2.0_unigene50872 SustainPine v2.0 495
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: c-terminal domain phosphatase-like protein 5.09839e-28
Putative N-terminus
sp_v2.0_unigene55093 SustainPine v2.0 151
AutoFact: Double-stranded RNA-binding domain (DsRBD)-containing protein-like n=2 Tax=Oryza sativa RepID=Q6H5U8_ORYSJ 6.0e-14
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 3.29699e-17
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain