Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene41037 SustainPine v2.0 556
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical protein VITISV_035792 [Vitis vinifera] 1.41469e-37
Internal
sp_v2.0_unigene41627 SustainPine v2.0 507
AutoFact: retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] 1.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 3.68541e-09
Internal
sp_v2.0_unigene42012 SustainPine v2.0 463
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 1.21609e-18
C-terminus
sp_v2.0_unigene44520 SustainPine v2.0 312
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 5.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 1.80151e-17
Putative C-terminus
sp_v2.0_unigene45886 SustainPine v2.0 258
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: ac055769_6copia-type 28768-32772 1.01368e-13
Internal
sp_v2.0_unigene47466 SustainPine v2.0 417
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-13
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia partial 1.25935e-16
C-terminus
sp_v2.0_unigene48046 SustainPine v2.0 253
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 5.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 2.26928e-18
C-terminus
sp_v2.0_unigene48572 SustainPine v2.0 493
AutoFact: Polyprotein-like, related n=1 Tax=Asparagus officinalis RepID=Q2AA73_ASPOF 1.0e-25
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon ty1-copia subclass 2.61698e-25
Internal
sp_v2.0_unigene49642 SustainPine v2.0 458
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q53P77_ORYSJ 1.0e-13
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 9.76549e-17
Putative C-terminus
sp_v2.0_unigene50459 SustainPine v2.0 247
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 3.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 4.6779e-22
Internal
sp_v2.0_unigene50652 SustainPine v2.0 296
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 2.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 5.18367e-17
C-terminus
sp_v2.0_unigene52793 SustainPine v2.0 372
AutoFact: Putative Zea mays retrotransposon Opie-2 n=2 Tax=Oryza sativa Japonica Group RepID=Q8H7T1_ORYSJ 1.0e-32
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 1.20444e-37
Putative C-terminus
sp_v2.0_unigene54916 SustainPine v2.0 323
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-23
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 2.77998e-26
Putative C-terminus
sp_v2.0_unigene55287 SustainPine v2.0 411
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 1.50767e-21
Putative C-terminus
sp_v2.0_unigene55484 SustainPine v2.0 320
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical protein VITISV_035792 [Vitis vinifera] 1.02865e-24
Internal
sp_v2.0_unigene56494 SustainPine v2.0 405
AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI 2.0e-18
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon ty1-copia subclass 4.04455e-18
N-terminus
sp_v2.0_unigene57091 SustainPine v2.0 267
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical protein VITISV_022473 [Vitis vinifera] 1.96627e-15
Internal
sp_v2.0_unigene59151 SustainPine v2.0 303
AutoFact: WS02810.BR_M24 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02810_M24 3, mRNA sequence. 3.0e-35
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.40013e-29
Putative C-terminus
sp_v2.0_unigene59821 SustainPine v2.0 251
AutoFact: Unassigned protein
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: hypothetical retrotransposon 2.68742e-11
Internal
sp_v2.0_unigene61534 SustainPine v2.0 867
AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 7.0e-39
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain