Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene58507 SustainPine v2.0 327
• AutoFact: gag-pol polyprotein, putative [Medicago truncatula] 2.0e-16
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: disease resistance protein 7.87674e-20
Internal
sp_v2.0_unigene58921 SustainPine v2.0 179
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: uncharacterized protein loc100846141 4.48622e-11
Internal
sp_v2.0_unigene58942 SustainPine v2.0 262
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 4.0e-19
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 8.45393e-19
Internal
sp_v2.0_unigene59381 SustainPine v2.0 636
• AutoFact: Putative polyprotein n=1 Tax=Solanum lycopersicum RepID=Q5GA69_SOLLC 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon ty1-copia sub-class 0.0
Internal
sp_v2.0_unigene59563 SustainPine v2.0 598
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera] 0.0
Putative C-terminus
sp_v2.0_unigene60052 SustainPine v2.0 383
• AutoFact: Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Nicotiana tabacum RepID=POLX_TOBAC 2.0e-35
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease 2.04982e-41
Internal
sp_v2.0_unigene60061 SustainPine v2.0 472
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene60709 SustainPine v2.0 862
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon unclassified 0.0
C-terminus
sp_v2.0_unigene62958 SustainPine v2.0 371
• AutoFact: Putative gag-pol polyprotein (Fragment) n=1 Tax=Picea abies RepID=B2KZG9_PICAB 2.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 3.2875e-39
Putative C-terminus
sp_v2.0_unigene63115 SustainPine v2.0 465
• AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 3.0e-05
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
sp_v2.0_unigene63886 SustainPine v2.0 725
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera] 0.0
Internal
sp_v2.0_unigene65131 SustainPine v2.0 288
• AutoFact: RVT_2 domain containing protein 4.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: hypothetical protein VITISV_028342 [Vitis vinifera] 1.91795e-25
Internal
sp_v2.0_unigene65376 SustainPine v2.0 297
• AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 1.0e-26
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon unclassified 1.03321e-32
Putative C-terminus
sp_v2.0_unigene66558 SustainPine v2.0 369
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-30
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 8.94806e-30
Internal
sp_v2.0_unigene68370 SustainPine v2.0 356
• AutoFact: Putaive copia-like retrotransposon polyprotein, 5'-partial (Fragment) n=2 Tax=Oryza sativa RepID=Q8W5D1_ORYSA 2.0e-10
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retrotransposon ty1-copia subclass 1.64456e-12
Internal
sp_v2.0_unigene69625 SustainPine v2.0 544
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: af478370_1gag-pol polyprotein 1.4013e-45
C-terminus
sp_v2.0_unigene69918 SustainPine v2.0 323
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: disease resistance protein 1.03863e-19
Internal
sp_v2.0_unigene70533 SustainPine v2.0 238
• AutoFact: Retroelement pol polyprotein-like n=1 Tax=Arabidopsis thaliana RepID=Q9LJ55_ARATH 5.0e-10
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: retroelement pol poly 4.64144e-12
Internal
sp_v2.0_unigene70630 SustainPine v2.0 149
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 5.0e-08
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: af229252_1reverse transcriptase 2.61656e-10
Internal
sp_v2.0_unigene70919 SustainPine v2.0 313
• AutoFact: Unassigned protein
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: copia-type polyprotein 4.51905e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain